| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2793 |
|---|
| Symbol | |
|---|
| ID | 8650338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 3098981 |
|---|
| End bp | 3100375 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF21 |
|---|
| Protein accession | YP_003327365 |
|---|
| Protein GI | 269957576 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGG TGCTCTCCCT TCTGCTCGGC GTCGTGGTCA TCCTGGCCAT CACCGCACTC
ACCGGCTACT TCGTGGCCCA AGAGTTCGCC TACATGGCGG TGGACCGCTC CCGCCTCGCA
GCCCGCGCCG CGTTGGGCGA CGCCGCCGCC CGACGCGCGC TGGCGGTCAC ACGACGCACC
TCCTTCATGC TCTCGGGCGC ACAGCTCGGC ATCACCGTGA CCGGACTGCT GGTCGGCTAT
GTCGCCGAGC CGCTGGTCGG CGCCGCCCTC GGCGCCGGGT TGGACGGCGC CGGCGTGCCC
GCCGCGGTGG GGGTCGGGAT CGGTACCGTC GCCGCACTCG CGCTGTCGAC GGTGGTGCAG
ATGGTGTTCG GCGAGCTGTT CCCGAAGAAC CTCGCCATCG CCCGCCCCGA GGGCGTCGCG
CTGTGGCTGG CACGCTCCAC CACCGTCTAT CTGGCCGCGT TCGGCTGGCT CGTGCGGGTC
TTCGACTCCG CTTCCAACGC CCTGCTGCGG CTGCTGCGCA TCGAGCCGGT GCACGATCTC
GAGCACTCGG CCACCGCACG CGACCTGGAG CACATCGTGG CGCGCTCGCG CGAGAGCGGG
GACCTGCCCC CAGACCTCTC CAACCTGCTG GACCGCATCC TGGACTTCCC CCGCCAGGAC
GTCGAGCACG CCATGATCCC CCGCTCCCGG GTGGACACCG TGGAGCCGGA CCTGACGGTC
GGCGAGGTCA AGGCACTCAT GGCACGCAGC CACTCCCGGT TCCCCGTGGT GGCCCGGGAC
GACGCGGTCG GCGTCGTGCA CATGACCGAC CTGCTCTCCG GCGACGTGCC CGACGACGCC
CTGGTCACCA CCGTCGCACG CCCGGCCCTG GTGCTCCCGA CCGCCATGAC CCTGCCCAAC
GCGCTGCGCG AACTGTCCAC CAGCCGCAAC GAGATGGCAT GCGTGGTCGA CGAGTACGGC
GGCTTCGCAG GCGTACTGAC GCTGGAGGAC CTGGCCGAGG AGCTGGTCGG GGAGATCACC
GACGAGCACG ACGATCCCCA GTCGCCGTTG CTGGTGACCG ACGACGACGG CGTCTGGGTC
ATGGCCGGTG ACGTGCACCT GGACGAGGTA GCGCGTGCCG TCGGACACGA CCTGCCTGAG
ACCGAGCACG AAACCATCGG CGGCCTGGCG GTCGCGACGC ACGGTTCTCT CCTGGACGTG
GGCGAGTCGG TGGACATCGA CCTGCCGGAC GACCCGGCCG ATCTGGCCGG CACGGCACCG
CCTCCGGACC GGGTGCTGCA CGTGCAGGTC CTGGAGATCG CGCGGCACGT ACCGGCCCAG
GTACGCGTCA CCGTCGAGGA ACGCCCACGC GGTACGAAGC CGCACGACAC CTACTCCGAG
GAGACCGACC GATGA
|
|---|
| Protein sequence | MTWVLSLLLG VVVILAITAL TGYFVAQEFA YMAVDRSRLA ARAALGDAAA RRALAVTRRT
SFMLSGAQLG ITVTGLLVGY VAEPLVGAAL GAGLDGAGVP AAVGVGIGTV AALALSTVVQ
MVFGELFPKN LAIARPEGVA LWLARSTTVY LAAFGWLVRV FDSASNALLR LLRIEPVHDL
EHSATARDLE HIVARSRESG DLPPDLSNLL DRILDFPRQD VEHAMIPRSR VDTVEPDLTV
GEVKALMARS HSRFPVVARD DAVGVVHMTD LLSGDVPDDA LVTTVARPAL VLPTAMTLPN
ALRELSTSRN EMACVVDEYG GFAGVLTLED LAEELVGEIT DEHDDPQSPL LVTDDDGVWV
MAGDVHLDEV ARAVGHDLPE TEHETIGGLA VATHGSLLDV GESVDIDLPD DPADLAGTAP
PPDRVLHVQV LEIARHVPAQ VRVTVEERPR GTKPHDTYSE ETDR
|
|---|
| |