| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2642 |
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| Symbol | |
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| ID | 8650185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylanimonas cellulosilytica DSM 15894 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013530 |
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| Strand | + |
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| Start bp | 2908437 |
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| End bp | 2910215 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_003327214 |
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| Protein GI | 269957425 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.750554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCCCC GATCCGCGTT CCGCGGCGCG AGACCGCACA TCCACGGGGG TGGCGCCGTC
TCGCGCGGGC CCGTGTCGGC GGCCGGTGGC AGCATCGACA GCGTGCTGTT CCACGACGTC
GCCGTGACCT CGGCCGGAGT GGCCGCGACC CGATCGCGGC TCGCCAAGCG CGAGCTGCTC
GCCGCGGCGC TCCGGGCCGC GGCCCACGGC GGCATGACCG GCGGCGATGC CACGGCGGAC
GGGGCCGCAG CAGGCGAGGG GATGGCGGGC GGGGCCGCGA CGGGCGGGGC CACGACAGGC
GGGCCCGGTT CCGACGACGG CAGGGCTGGT GAGGAGGTCG ACGTCGTCGC GACGTTCCTC
TCGGGGCGGG TGCGGCAGCG GCGCACGGGG GTCGGCTGGC GGTCGCTCAC GTCGCTCCCC
GCGCCCGCGT CCGCGCCGAC CCTCACCCCG CTCGACGTGG ACGCCGCGCT GCAGACGATG
GCCGACGCCG AAGGGCCGGG GTCGGCGGCC GTGCGCGGCG AGGCGGTGCG CCGTCTCTTC
GCTGCGGCGA CGCAGGACGA GCAGACCTTC CTGCGTGGCC TGATCGTCGG CGAGCTGCGG
CAGGGAGCGC TCGACTCGCT GCTCCTCGAC GCCGTCGCTG CCGCCGCCGA CGTCCCGCTC
GCCGCGGTGC GGCGGGCCGC CATGTTCAGC GCACCGTCCG GGCCGATCGC CCGCGCTGCC
CTGACCGGGG GCGCTGCGGC CCTCGCCGCG TTCCGGCTCG AGCCCGGGCG TCCGGTGCGT
CCCATGCTCG CCTCCCCCGC GCCCGATGTC GCGGCTGCGC TGGCCGGCAT CGGCGGCCCG
GTCGCCGTCG AGGCGAAGAT CGACGGCATC CGCGTCCAGC TCCACAAGCA TGGCAACGAC
GTCGCCGTCT ACACCCGCTC GCTCGACGAC GTCACCGAGC GGCTGCCCGA GCTCGTCGCG
CTGCTGCGGT CACTGCCGGT CGCCACCGCG GTGCTCGACG GCGAAGCGAT CGCCCTGGGC
GCCGACGGCC GCCCGCTCGC CTTCCAGGAC ACCGCCGCGC GCACCGGGTC GCACGACGCC
GACGCGACCG GCCGCGTGCC GCTGACCGCC TTCCTCTTCG ACGCGCTGCA CCTGGCCGGC
CGGGACCTGG TCGACGCGCC CGAGTCCGAA CGGTTCGCCG CCCTCGAACG CGTGGCTCCG
CCGTCGGCCC TGGTGCGCCG GATCGTGACG GCGGACCCCG ACGAGGCGAC CGCCTTCTTC
GCGGAGGTGC TCGCGAGCGG CCACGAGGGC GTGGTCGTCA AGGACCTCGC CGCGCCGTAC
GACGCCGGAC GACGCGGCGG CGCCTGGGTC AAGGTCAAGC CACGGCACAC GCTCGACCTC
GTGGTGCTGG CCGTGGAACG CGGCTCGGGC CGCCGCTCGG GCTGGCTGTC GAACATCCAC
CTGGGCGCCC GGGTGCCCGG CGCAGGCCCG GACAGCGCCG ACGGTTGGGT GATGCTCGGG
AAGACGTTCA AAGGGATGTC GGACGAGATG CTCGCGTGGC AGACCGCCCG GTTCACCGAG
CTCGCGGACG GACCGGCCGA CGGGTGGGTC GTGCGGGTCC GTCCGGAGCA GGTGGTCGAG
ATCGCGTTCG ACGGCGTGCA GCGTTCGACG CGGTACCCCG GGGGTGTTGC GCTGCGGTTC
GCCCGGGTGC TGCGCTACCG CGACGACAAG CCGGCGGCGG AGGCCGACAC GATCGACGCG
GTGCGCGCGA TCGCGGGCGG GAACGCCTCC GGTGGTTGA
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| Protein sequence | MPPRSAFRGA RPHIHGGGAV SRGPVSAAGG SIDSVLFHDV AVTSAGVAAT RSRLAKRELL
AAALRAAAHG GMTGGDATAD GAAAGEGMAG GAATGGATTG GPGSDDGRAG EEVDVVATFL
SGRVRQRRTG VGWRSLTSLP APASAPTLTP LDVDAALQTM ADAEGPGSAA VRGEAVRRLF
AAATQDEQTF LRGLIVGELR QGALDSLLLD AVAAAADVPL AAVRRAAMFS APSGPIARAA
LTGGAAALAA FRLEPGRPVR PMLASPAPDV AAALAGIGGP VAVEAKIDGI RVQLHKHGND
VAVYTRSLDD VTERLPELVA LLRSLPVATA VLDGEAIALG ADGRPLAFQD TAARTGSHDA
DATGRVPLTA FLFDALHLAG RDLVDAPESE RFAALERVAP PSALVRRIVT ADPDEATAFF
AEVLASGHEG VVVKDLAAPY DAGRRGGAWV KVKPRHTLDL VVLAVERGSG RRSGWLSNIH
LGARVPGAGP DSADGWVMLG KTFKGMSDEM LAWQTARFTE LADGPADGWV VRVRPEQVVE
IAFDGVQRST RYPGGVALRF ARVLRYRDDK PAAEADTIDA VRAIAGGNAS GG
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