| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2616 |
|---|
| Symbol | |
|---|
| ID | 8650159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2880113 |
|---|
| End bp | 2882596 |
|---|
| Gene Length | 2484 bp |
|---|
| Protein Length | 827 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | glycosyltransferase 36 |
|---|
| Protein accession | YP_003327188 |
|---|
| Protein GI | 269957399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.294292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACG GCCACTTCGA CGACTCGGCG CGCGAGTACG TCATCACGAC GCCACACACG
CCGTACCCCT GGATCAACTA CCTCGGGTCG GAGCAGTTCT TCTCGCTGCT CAGTCATCAA
GCGGGCGGGT ACTCGTTCTA CCGGGACGCC AAGCTGCGCC GTCTGACGCG GTACCGCTAC
AACAACATCC CCACCGACGT CGGCGGCCGC TACCTGTTCG TCAACGACGG CGGTGACGTG
TGGACGCCGT CGTGGCTGCC GGTCAAGGCC GACCTGGACC ACTTCGAGGC CCGCCACGGG
CTGGGCTACT CGTCCATCAC CGGCGAGCGC GGCGGCCTGC GCGTACAGAC CACCTTCCTG
GTGCCGCTGG GGGAGACCGC CGAGGTCCAG AAGATCACCT TCACCAACAC CTCCGACGCC
GCCAAGTCGA TCTCCGCGTT CACCTACGTC GAGTTCTGCC TGTGGAACGC CGAGGACGAC
CAGACCAACT ACCAGCGCAA CCTGTCCATC GGCGAGGTCG AGGTCGAGAC CTCCACGCCG
TCGGGCGGCG CCGCGATCTA CCACCGCACC GAGTACCGCG AGCGCCGCGA TCACTTCGCC
GTCTACGGCG TCAACGTGCC GACGGGCGGC TTCGACACCG ACCGGGACGC GTTCGTGGGC
GCGTACAACA CGCTCGGGGA GGCGGCGGTG CCACGCGCGG GGGCGTCGAC CGGGTCGGTG
GCCAGCGGCT GGTACCCGAT CGGCTCCCAC CAGCTCGACG TCGAGCTCGC ACCGGGGGAG
TCGACCGACG TCGTCGTCGT CCTCGGGTAC GTGGAGAACC CGCAGGAGGA GAAGTGGGCC
GACGACGCCC ACCAGGTCGT CAACAAGGAG CGCGCGCACG CGCTGCTCTC GCGGTTCGCG
ACCGTCGACG CCGTCGACGC CGCCCTGGCG GCCCTGCAGG ACCACTGGAC GAACCTGCTG
TCGACGTACG AGGTGCGCTC GGGCGACGAG AAGCTCGACC GGATGGTCAA CATCTGGAAC
CAGTACCAGT GCATGGTCAC GTTCAACATG TCCCGTTCGG CGTCGTACTT CGAGACCGGC
ATGGGGCGCG GCATGGGGTT CCGGGACTCG TCGCAGGACC TGCTCGGCTT CGTGCACCTG
ATCCCCGAGC GGGCGCGTGA GCGCATCATC GACATCGCCT CGACGCAGTT CCCCGACGGC
TCGGCGTACC ACCAGTACCA GCCGCTGACG AAGCGCGGGA ACCACAACCT GGGCTCGGGC
TTCAACGACG ACCCGATGTG GCTCGTCGGT GGCGTGGCCG CGTACATCAA GGAGACCGGC
GACTGGGGCA TCCTCGACGA GCCCGTGCCG TTCGACAACG AGCCCGGCAC CGAGGTGCCC
CTCTTCGAGC ACCTGTCGCG CTCCGTGGAC TTCGTGCTCA CGCACCTGGG CCCGCACGGC
CTGCCCCTCA TCGGCCGCGC CGACTGGAAC GACTGCCTCA ACCTCAACTG CTTCTCGACG
ACGCCGGGCG AGTCGTTCCA GACGACGGGC AACAAGACCG GCGGTGTCGC GGAGTCGACG
TTCATCGGCG CCCAGTTCGT GCTGTACGGG CGCGAGTACG TGGCGCTGGC GCAGCACCGG
GGCGCCGCGG ACGAGGCCGT GCGGGCCGCG GAGGCCGTCG AGGCGATGAC GACGACGATG
CTCACCGACG CGTGGGACGG CCGCTGGTTC CTGCGCGCCT TCGACTACTA CGGCAACCCC
ATCGGCACCG ACGCCCACGA CGAGGGCAAG ATCTGGATCG AGCCGCAGGG CTTCTCGGTC
ATGGCGGGCA TCGGCGTCTC GTCGACGGAC CCCACGGCGC CCGAGTGGGC GGCCTCGCCT
GCCGGGAAGG CGCTCACCGC CGTCGAGGAG CTGCTCGGCA CGGACCACGG CATGGTGCTC
CAGTACCCGG CGTACACCAC CTACCAGGTA CACATGGGTG AGGTCTCGAC CTACCCGCCG
GGCTACAAGG AGAACGGCGG CATCTTCTGC CACAACAACC CGTGGGTGAT CATCGGGCAG
ACGGTCGCAG GGGACGGCGC CGGCGCCTTC GCGAACTACC GGAAGATCAC CCCCGCGTAC
CGCGAGGACA TCTCCGACGT CCACCAGCTC GAGCCGTACG TGTACGCGCA GATGATCGCG
GGCAAGGAGG CGGTGCGGCA CGGCCAGGCC AAGAACTCGT GGCTGACCGG CACCGCGGCC
TGGAACTTCG TGGCCGTGTC GCAGTACCTG CTGGGTGTGC GCCCTGACTA CGAGGGCCTC
GTCGTCGACC CGCAGCTCGG CCCGGACGTC CCGGAGTTCA CGGTCACCCG CGTGGCCCGC
GGCGCTACCT ACGAGATCAC GGTCCGCAAC AGCGGCACGC CGGGCGCCCG GGCGGCGCTC
ACGGTGGACG GCCGGCCCAT CGACGGGCGG ACCGTCCCGT ACGCGGCGGC GGGCACCACG
GTCCGCGTGG AGGCGGTGCT CTGA
|
|---|
| Protein sequence | MRYGHFDDSA REYVITTPHT PYPWINYLGS EQFFSLLSHQ AGGYSFYRDA KLRRLTRYRY
NNIPTDVGGR YLFVNDGGDV WTPSWLPVKA DLDHFEARHG LGYSSITGER GGLRVQTTFL
VPLGETAEVQ KITFTNTSDA AKSISAFTYV EFCLWNAEDD QTNYQRNLSI GEVEVETSTP
SGGAAIYHRT EYRERRDHFA VYGVNVPTGG FDTDRDAFVG AYNTLGEAAV PRAGASTGSV
ASGWYPIGSH QLDVELAPGE STDVVVVLGY VENPQEEKWA DDAHQVVNKE RAHALLSRFA
TVDAVDAALA ALQDHWTNLL STYEVRSGDE KLDRMVNIWN QYQCMVTFNM SRSASYFETG
MGRGMGFRDS SQDLLGFVHL IPERARERII DIASTQFPDG SAYHQYQPLT KRGNHNLGSG
FNDDPMWLVG GVAAYIKETG DWGILDEPVP FDNEPGTEVP LFEHLSRSVD FVLTHLGPHG
LPLIGRADWN DCLNLNCFST TPGESFQTTG NKTGGVAEST FIGAQFVLYG REYVALAQHR
GAADEAVRAA EAVEAMTTTM LTDAWDGRWF LRAFDYYGNP IGTDAHDEGK IWIEPQGFSV
MAGIGVSSTD PTAPEWAASP AGKALTAVEE LLGTDHGMVL QYPAYTTYQV HMGEVSTYPP
GYKENGGIFC HNNPWVIIGQ TVAGDGAGAF ANYRKITPAY REDISDVHQL EPYVYAQMIA
GKEAVRHGQA KNSWLTGTAA WNFVAVSQYL LGVRPDYEGL VVDPQLGPDV PEFTVTRVAR
GATYEITVRN SGTPGARAAL TVDGRPIDGR TVPYAAAGTT VRVEAVL
|
|---|
| |