Gene Xcel_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_2089 
Symbol 
ID8649620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand- 
Start bp2240657 
End bp2241340 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content76% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003326665 
Protein GI269956876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0760206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCACAC GTGCCCCACG CAGCCTGCGC GTCGTCGTCG CCGGCGGCCA CGGCCAGATC 
GCGCTGCTGC TCACCCGCAC CCTGACCGAC CGGGGGCACG ACGTCGTCGG CATCGTCCGC 
AACCCTGACC ACGTCGCCGA CGTCGAGGCC GTGGGCGGCT CCGCCGTCGT CCAGGACCTG 
GAGGCGTCCG ACGTCGTCGC GGTGGCCGAG GTGCTGACCG GAGCGGACGC CGTCGTCTTC 
GCGGCCGGCG CGGGGCCGGG CAGCACCGCG GAGCGCAAGT ACACCGTCGA CCGTGACGCG 
TCGATCCTGC TCGCCGCGGC CGCCGAACAG GCGGGGGTCA AGCGGTTCGT GCAGGTCTCG 
ACCAGCCGGG CTGGCTCCCC CGCGGCGACG GGGTCCACGC CGGTGTGGGT CGCGTACATC 
GACGCGAAGA CGCAGGCCGA GGACGCGCTC AAGGCGACGA ACCTGGACTG GACGATCCTG 
CGCGCGGGCG CGCTGACGAA CGGCCCGGGC ACCGGACGGG TCACCCTCGC GGGGCGCCAC 
GTGCCGCGCG GCACCGTCCC GCGAGCCGAC GTCGCGACCG TGCTCGCGGA GCTCGTCGTC 
TCCGGCGCCG CGGTGCGCCG CACCCTGGAG CTGACGACGG GCCACGTCCC GATCGCGACC 
GCGGTGGCGG CGACGGCCCA GTAG
 
Protein sequence
MPTRAPRSLR VVVAGGHGQI ALLLTRTLTD RGHDVVGIVR NPDHVADVEA VGGSAVVQDL 
EASDVVAVAE VLTGADAVVF AAGAGPGSTA ERKYTVDRDA SILLAAAAEQ AGVKRFVQVS 
TSRAGSPAAT GSTPVWVAYI DAKTQAEDAL KATNLDWTIL RAGALTNGPG TGRVTLAGRH 
VPRGTVPRAD VATVLAELVV SGAAVRRTLE LTTGHVPIAT AVAATAQ