| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2080 |
|---|
| Symbol | |
|---|
| ID | 8649611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2230703 |
|---|
| End bp | 2231215 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | membrane-flanked domain protein |
|---|
| Protein accession | YP_003326656 |
|---|
| Protein GI | 269956867 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.222233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACT CTGAAGACAA CGGCTCGCAG CTCACCCTGC GGCCCCCGAA GAACCGGGTC
GAGCGGCGCG CCATCGGATG GTGGATGCTG CAGTCCCTGG CCTTCTTCGC TCCGATCCTG
GCCGCGTCCA TCGTGGCCTT CGTGCTGTGG GAAGCGGCCC GGCCATGGCT GATCGTCGCC
GTGGTCGTGT CGGCAGTGCT GCTGGTCGTC GGGGTGGTGG TCGAGCCGCT GTGGAGGTAC
CGCGTCCACC GCTGGGAGGC CACCAGCCAG GCCGTCTACG CCCGCACGGG GTGGCTCGTC
CGGGAGTGGC GGGCCGCGCC GCTGTCGCGC GTCCAGACGG TCGACGCCGT CCAGGGCCCC
CTCGAGCAGA TGCTGGGCCT GTCCACGCTC CGCGTGACCA CCGCGTCCGC GCAGGGCGCC
ATCAGCATCG GCGGGATCGA CAAGGACACC GCGGCACGCG TTGCCGAGGA CCTCACCCGG
ATCGCCGAGC TGATCCCTGG TGACGCCACG TGA
|
|---|
| Protein sequence | MNNSEDNGSQ LTLRPPKNRV ERRAIGWWML QSLAFFAPIL AASIVAFVLW EAARPWLIVA
VVVSAVLLVV GVVVEPLWRY RVHRWEATSQ AVYARTGWLV REWRAAPLSR VQTVDAVQGP
LEQMLGLSTL RVTTASAQGA ISIGGIDKDT AARVAEDLTR IAELIPGDAT
|
|---|
| |