Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1897 |
Symbol | |
ID | 8649427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 2043218 |
End bp | 2044171 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003326474 |
Protein GI | 269956685 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.221334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCACGA CGCCCGGGAT CCTGATCTCG CGAGACCACG ACCGTGCCGA GCTGGCCCGC GCGACGCGGC GCGGCGAGGT CGAACGGCTG CGCAGCGGCG CCTACCGGGT GGTCGATCCG GCCGGTTCCG GTATCGAGTA CGACTCCGAC GAGCTCGCGC GTGTCCTCGC GACACACCAG CAGCTCACCT CACCGCACGT GTTCAGCCAC GAGACTGCGG CGCTCATCTG GGGCTACCGC CTCTGGACCG CCCCGCGGCG CACCCATGTG ATCCAGGGCT ACCGCGCCTC GGGCAGGGCA GCACGAGACC TTTCGCGGCA CTATGTGACC CTCGCCGACG ACGACGTCGC CACACGCTAC GACCTGGCCG TCACATCCCC GGTGCGGACC GTCGTCGACT GTGCTCTCAC GATGCACCCC CTGGAAGGCC TCGTCGTCGC CGACGCTGCG CTCGCGGCCG GGCTGGACCG ACAGGCGGCG CTCGCCCACC TCGCGGCGCG CGCCGGTGCT CCGGGCCGCC GCCGTGCGCG GCTGGTCCTG GAGCTGGCCG ACGCGGGCGC CGAGTCGGCG TGGGAGACCT GGCTCCGCTA CCTCGCCGCG CGCACCGGGC TCCCACGCCC GACGACGCAG CATGTCGTCG CGACGCGGCT GGGCAGGTTT CGCGTCGACC TTGCCTGGCC GGGCCACGGC GTTCTCGCGG AGTTCGACGG TCGGGTCAAG TACCGCGATG GTGCGTTCGG AAAGCGCTAC GAAGGCGAGA CAGCCCGTTT CGAGGAGAAG CGGCGCGCGG ATGCGATCGA GGAGGCCACG GGACGCGGAC TCTTGCGTGT CACCGCCCGG GACCGGCCCG CGGAGGTGGA GGCCCGGCTG CTGGCCCGCT TCCCCCAGGA GGTCGCGCTG ACGGCCCGCC CCCTCCCGCT CCTTCGCCCG GTCCCACCGC CGCCCAAGCG ATAG
|
Protein sequence | MITTPGILIS RDHDRAELAR ATRRGEVERL RSGAYRVVDP AGSGIEYDSD ELARVLATHQ QLTSPHVFSH ETAALIWGYR LWTAPRRTHV IQGYRASGRA ARDLSRHYVT LADDDVATRY DLAVTSPVRT VVDCALTMHP LEGLVVADAA LAAGLDRQAA LAHLAARAGA PGRRRARLVL ELADAGAESA WETWLRYLAA RTGLPRPTTQ HVVATRLGRF RVDLAWPGHG VLAEFDGRVK YRDGAFGKRY EGETARFEEK RRADAIEEAT GRGLLRVTAR DRPAEVEARL LARFPQEVAL TARPLPLLRP VPPPPKR
|
| |