Gene Xcel_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1673 
Symbol 
ID8649197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1810928 
End bp1813273 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content70% 
IMG OID 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_003326254 
Protein GI269956465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACG AGGTCAAGGC CGCGCGCGCC GAGGGCGCGG TCGGTACGAG CGCTTCGACG 
CCGAGCACCG GCATCCGCAG CCGCCTGGTC CGCCTCGGGG TACGCGGTGG CGGAGGCGTC
AGCCCTGCTC TCGAACCGCT GCTCCAGGCG GTGCGCGCCG CTCACCCCAA GTCCGATCTC
GCGGTCATCG AGCGGGCGTA CACGGTGGCC GAGAAGGCGC ACCGGGGCCA GCTCCGCAAG
AGCGGCGACC CGTACATCAC GCACCCGGTG TCGGTGGCGA CGATCCTGGC CGAGCTCGGC
TTCGAGGGCA CCACGATCGC CGCGGCCCTG CTGCACGACA CGGTCGAGGA CACCGACTAC
TCGCTCGACC AGCTCCGCAC CGACTTCGGC GACGATGCCG CCCTGCTGGT CGACGGCGTC
ACCAAGCTCG ACAAGGTGAA GTACGGCGAC GCCGCCCAGG CCGAGACCGT GCGCAAGATG
GTCGTGGCGA TGGCCAAGGA CATCCGCGTG CTGGTCATCA AGCTCGCCGA CCGTCTGCAC
AACGCGCGCA CCTGGAAGTA CGTGCCGTCG TCGTCGGCGG AGCGCAAGGC GCGCGAGACG
CTCGAGATCT ACGCCCCGCT GGCGCACCGC CTGGGCATGA ACACCATCAA GTGGGAGCTG
GAGGACCTGT CCTTCCAGGC CCTCTACCCC AAGGTGTACG ACGAGATCGT GCACCTGGTG
GCCGAGCGCG CCCCGGCGCG CGAGGAGTAC CTGTCGGTGG TGCGCGAGCA GATCCAGGCC
GACCTGCGCG GCGCGAAGAT CAAGGCCACC GTCACCGGGC GGCCCAAGCA CTACTACTCG
ATCTACCAGA AGATGATCGT CCGGGGGCAC GACTTCCAGG ACATCTACGA CCTGGTGGGC
ACGCGCGTCC TGGTGGACTC GGTGCGCGAC TGCTATGCGG CGCTCGGCGC CCTGCACGCG
CGCTGGAACC CGGTCCCGGG CCGGTTCAAG GACTACATCG CGATGCCCAA GTTCAACATG
TACCAGTCGT TGCACACGAC GGTCGTGGGG CCGGGCGGCA AGCCCGTCGA GATCCAGATC
CGCACGCACG ACATGCACCG CCGGGCGGAG TACGGCGTCG CGGCGCACTG GAAGTACAAG
GAACCGGCGA AGCAGGGCAA GCCCGGCGCC ACCCCCGAGG AGCAGCGCAC CAACGACATG
GCATGGCTGC GCCAGCTCGT CGACTGGCAG CGGGAGACGG CCGACCCCAG CGAGTTCCTG
GACTCGCTGC GCTACGAGAT CGGCGGCGCC GAGGTCTACG TGTTCACGCC GAAGGGCCAG
GTCATGGCCC TTCCGGCAGG GTCGACGCCG GTGGACTTCG CCTACTCGGT GCACACCGAG
GTGGGCCACC GCACCATGGG CGCGCGCGTC AACGGGCGCC TGGTGCCGCT CGACTCGCAG
CTCCAGAACG GCGACGTCGT CGACATCCTC ACCTCGAAGG CGGAGAGCGC CGGGCCGAGC
CGCGACTGGC TGTCCTTCGT GAAGTCCGCG CGGGCGCGCA ACAAGATCCG TGCCTGGTTC
ACCAAGGAGC GCCGCGAGGA GGCCATCGAG CACGGCCGCG ACGCCATCAC CAAGGCGATG
CGCAAGCAGA ACCTGCCGAT CCAGCGCCTG CTCTCGCACG AGACGCTGGT GGGCCTGGCC
ACGGAGCTGC GGTTCGCGGA CGTCTCCGCG CTGTACGCGG CCGTGGGCGA GGGACACGTG
TCCGCGCCGC ACGTCGTCGA GCTGCTGGTC AAGTCCCTCG GCGGAGCGGA CGGCACCGAG
GAGGACACGG CCGAGGCAGC CGTCCCGGGC GTGCCGACGA CGCCGCGGCG GACCCGCACC
GGTGACCCGG GCATCGTCGT GCGCGGGGTC GAGGACATCT GGGTCAAGCT CGCCAAGTGC
TGTACCCCGG TGCCGGGCGA CGAGATCATC GGGTTCGTCA CGCGCGGCGC CGGCGTCTCG
GTGCACCGGG CGGACTGCGC GAACGTCGAC GGGCTGCGGG CGCAGCCGGA GCGCATCGTC
GACGTGGCCT GGTCCACCGG GTCGAGCGCC ACGTTCCTGG TGCAGATCCA GGTCGAGGCG
CTCGACCGCT CCCGTCTGCT GTCGGACATC ACCCGGGTGC TGTCCGACAA CCACGTCAAC
ATCCTCTCGG CGAGCGTCTC GACCACCCAG GACCGCATCG CGATGTCCCG GTACGTGTTC
GAGATGGCCG AGCCGGCGCA CCTGGCGCAG GTGCTCTCCG CGGTGCGCAA GGTCGACGGA
GTCTTCGACG TCTACCGCAT CACCGGCGCC AAGGCCGCCG CCGCCCCGCA CCTCCCGCCC
CTGTAG
 
Protein sequence
MSDEVKAARA EGAVGTSAST PSTGIRSRLV RLGVRGGGGV SPALEPLLQA VRAAHPKSDL 
AVIERAYTVA EKAHRGQLRK SGDPYITHPV SVATILAELG FEGTTIAAAL LHDTVEDTDY
SLDQLRTDFG DDAALLVDGV TKLDKVKYGD AAQAETVRKM VVAMAKDIRV LVIKLADRLH
NARTWKYVPS SSAERKARET LEIYAPLAHR LGMNTIKWEL EDLSFQALYP KVYDEIVHLV
AERAPAREEY LSVVREQIQA DLRGAKIKAT VTGRPKHYYS IYQKMIVRGH DFQDIYDLVG
TRVLVDSVRD CYAALGALHA RWNPVPGRFK DYIAMPKFNM YQSLHTTVVG PGGKPVEIQI
RTHDMHRRAE YGVAAHWKYK EPAKQGKPGA TPEEQRTNDM AWLRQLVDWQ RETADPSEFL
DSLRYEIGGA EVYVFTPKGQ VMALPAGSTP VDFAYSVHTE VGHRTMGARV NGRLVPLDSQ
LQNGDVVDIL TSKAESAGPS RDWLSFVKSA RARNKIRAWF TKERREEAIE HGRDAITKAM
RKQNLPIQRL LSHETLVGLA TELRFADVSA LYAAVGEGHV SAPHVVELLV KSLGGADGTE
EDTAEAAVPG VPTTPRRTRT GDPGIVVRGV EDIWVKLAKC CTPVPGDEII GFVTRGAGVS
VHRADCANVD GLRAQPERIV DVAWSTGSSA TFLVQIQVEA LDRSRLLSDI TRVLSDNHVN
ILSASVSTTQ DRIAMSRYVF EMAEPAHLAQ VLSAVRKVDG VFDVYRITGA KAAAAPHLPP
L