Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1396 |
Symbol | |
ID | 8648917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1522620 |
End bp | 1523378 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003325985 |
Protein GI | 269956196 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.471533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACGC TCGTCAACGC GACCAAGCGC TACGGCCGGA CGACGGTGCT GGACGACGTG ACCGTCTCGT TCGGCGGTGA GGGCATCACC GCACTGATCG GCCCGAACGG AGCCGGCAAG TCGACGCTGT TCGGCCTCGT CGGCCGGCTC ATCAAGCCCG ACCTGGGCCG GGTGGCCGTG GAGGGCAAGG ACGTCAGCAG CACGCCGTCC TCCGAGCTCG CGAAGGTGCT CGCCGTCCTG CGCCAGGACA ACCACATCGT CGCGCGGCTC ACGGTGCAGG ATCTCGTCGA GCTCGGCCGG TTCCCCCACT CGCGGGGGCG GCTCACCGTC GCGGACCGCG AGCACATCGA GCGGGCGATC GACTACCTCG ACCTGGGGGA GTACCGCGAC CGGTTCCTCG ACGAGCTGTC AGGGGGCCAG CGGCAGCGCG CCTTCATCGC GATGGTGCTC GCACAGGACA CGAGGTACGT GCTGCTGGAC GAGCCGCTCA ACAACCTCGA CCTGCGCCAC ATGACCGAGA TCATGAAGCT CGTGCGGCGG ATGGCCGACG AGCTCGGCAA GCGCGTGATC GTGGTGCTGC ACGACATCAA CTTCGCCGCG ACGTACGCCG ACCGGATCGT CGCGATGCGT GACGGGCGGA TCGTCGCGGA CGCGACGCGC GACGAGATCA TGCGCCCGGA GGTGCTGCAC GCGGTGTACG ACACGACGGT CGACGTGCGC GAGATCGACG GCAGGCCCGT CGCGCTCTAC TACGGCTGA
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Protein sequence | MITLVNATKR YGRTTVLDDV TVSFGGEGIT ALIGPNGAGK STLFGLVGRL IKPDLGRVAV EGKDVSSTPS SELAKVLAVL RQDNHIVARL TVQDLVELGR FPHSRGRLTV ADREHIERAI DYLDLGEYRD RFLDELSGGQ RQRAFIAMVL AQDTRYVLLD EPLNNLDLRH MTEIMKLVRR MADELGKRVI VVLHDINFAA TYADRIVAMR DGRIVADATR DEIMRPEVLH AVYDTTVDVR EIDGRPVALY YG
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