| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0468 |
|---|
| Symbol | |
|---|
| ID | 8647971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 546698 |
|---|
| End bp | 547993 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_003325065 |
|---|
| Protein GI | 269955276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGCAG GGTCGCACGA CGACGCCGAC GTCATCGTCG TGGGCGCCGG TCCGGCCGGG
TCCTCGACCG CCCACTGGTG CGCCAGTGCC GGCCTCGACG TGCTGCTCCT GGAGAAGTCG
GCGTTCCCCC GCGACAAGAT CTGCGGCGAC GGCCTGACGC CGCGCGCGGT CGCCGAGCTG
GCCCGCATGG GCGTTGCCCT CGACCCCGAC GACGGCTGGA TCCGCAACGA GGGCCTGCGC
GTGCTCGCCG GCCGCCGCTC GTGGGAGCTG CCCTGGCCCG AGGTCACGGC GTTCCCCGGC
TACGGCTCCG CGATGGCCCG CGCGACGCTC GACCACCGCC TGGCCCAGCA CGCCCAGCGC
AGCGGCGCCA AGCTGGTCGA GCGCACCAAG GTGACCGGCC CGCTGCTCGA CGAGCGCAGC
GGCCGCACCG TCGGCGTCGT CGCGCAGTCC GCCGACCGGC GTGAGGTGGT CTACCGCGCC
CCCGTCGTCG TCGCCGCCGA CGGCGTCAGC TCGCGCTTCG CGACGGCGCT GGGCATCACG
CGGCGCGACG ACCGCCCGAT GGGCACGGCG TACCGGACGT ACTTCCGCTC GGAGGGCACC
AGCCGGCACG CGGACGCGTG GATGGAGTCC CACCTCGAGC TGTGGTCGGG CGAGCCCGGC
CGGTCCGACC TGCTGCCGGG GTACGGCTGG ATCTTCGCCC TCGGCGACGG CACCGTGAAC
GTGGGCCTGG GCTCGGTGTC GAGCACCCCC GCCCGGCAGT CGGCGGTGGG GCACGACTAC
CGGGCGCTGC TCCAGCAGTG GACGCGCAAC ACCCCCGAGG ACTGGGGCTT CACGCCCGAG
AACCAGGTGG GCCCGATCCG CGGCGCCGCG CTGCCGATGG GCTTCAATCG CACCCCGATG
TACCGGGACG GGACGATCCT CGTCGGCGAC GCCGCCGGCA TGGTCAGCCC GTTCAACGGC
GAGGGCATCG CCTACGCCCT GCAGGCCGGA CGCGTCGCCG CCGACGCGAT CGCCCAGGCC
CGCACCCGCA CCACCGACGC GGCCCGCGAG GCGGTGCTCG GCGGTTACGC CGAGCGCATG
CGCGCGGACC TCGGCGGCTA CTACACGCTG GGCCGGGCGT TCGTCCGGCT CATCGAGCAC
CCGGCGATCA TGCGCTTCGG CACGCGGTAC GCGTTGCCCG TGCCGGTCGT CATGCAGTTC
GTCGTGAAGC TCTTGTCGGA CTGTTACGAA CCGCGCGGAG GGGACTGGGT CGACCGGCTC
ATCTCCGCGT TGACCCGCGT GGTCCCGGCG GCCTAG
|
|---|
| Protein sequence | MRAGSHDDAD VIVVGAGPAG SSTAHWCASA GLDVLLLEKS AFPRDKICGD GLTPRAVAEL
ARMGVALDPD DGWIRNEGLR VLAGRRSWEL PWPEVTAFPG YGSAMARATL DHRLAQHAQR
SGAKLVERTK VTGPLLDERS GRTVGVVAQS ADRREVVYRA PVVVAADGVS SRFATALGIT
RRDDRPMGTA YRTYFRSEGT SRHADAWMES HLELWSGEPG RSDLLPGYGW IFALGDGTVN
VGLGSVSSTP ARQSAVGHDY RALLQQWTRN TPEDWGFTPE NQVGPIRGAA LPMGFNRTPM
YRDGTILVGD AAGMVSPFNG EGIAYALQAG RVAADAIAQA RTRTTDAARE AVLGGYAERM
RADLGGYYTL GRAFVRLIEH PAIMRFGTRY ALPVPVVMQF VVKLLSDCYE PRGGDWVDRL
ISALTRVVPA A
|
|---|
| |