Gene Xcel_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0466 
Symbol 
ID8647969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp544002 
End bp545345 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content77% 
IMG OID 
Productisochorismate synthase 
Protein accessionYP_003325063 
Protein GI269955274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGAT CCGCCCTGCC CCAGCCTGCG TTCCCCGCGG GGTCCGCGCC CGACGGCGGC 
CGGGCGGTCG GCGCCCAGCC CCTCGTGGTC CGGACCGCCC CGATCTCCCT GCCCGACGGC
GGCCTCACCA CCCTGGTCGA CCTGCTCCCC GATGCGAAGC CGCTCGCCTG GGTGCGCCGC
GGCGACGGCA TCGTCGGCTG GGGCGAGGCG CTGCGGATCA CCACCACCGG CGAGGCGCGC
TTCAGCGACG CCGACGCCGC GTGGCAGTCC CTGCTCGACC GCGCCGTCGT CCGCGACGAC
GTCCGCCTGC CGGGCACCGG CCCGGTCGCG TTCGGCTCCT TCGCCTTCGA CGCCACGTCC
GACGACGGCG GAGTCCTCGT CGTGCCGCGC GTCGTCGTCG GGCGGCGCGG GGACCGGGCG
TGGATCACCA CCATCGCCGC CGGGCTGGAC GCCGCACCGA CCGCCGCCCT GCTGGACCCG
GCGCGCCGCA CGCCGGTGAC CGGTCCCGGC GCGGTCACCG AGTCCGACGG CGCGGTCGCC
GCGGCCGACT GGCCCGCGAT CGTGGCCGAC GCCGTCGAGC GCATCCAGGC CGGGCGTCTC
GAGAAGGTGG TCCTCGCGCG CGACGTCGTG GCCACCACGG GCCGGGCCCT CGACCCGCGC
TGGCTGCTGC GCCGCCTCGC CGCCGGGTAC GAGGCCACCT GGACGTTCTC GGTCGCCGGC
ATGGTGGGCG CCACCCCGGA GCTGCTGGTC CGCTCGGAGA AGGGCCTGGT CGCCTCGCGC
GTGCTGGCCG GGACCATCCG CCGCGCGCCC GGCATGACCG ACGACGACGC CCTGCTGCAC
GCCGCCCAGC TCGCACGGTC TTCCAAGGAC CTCGAGGAGC ACGAGCACGC CGTCGTCTCC
GTGGCGCGGG CACTCGAACC GTTCTGCACC TCGATGAACG TGCCCGAACA GCCGTTCGTG
CTGCACCTGC CGAACGTCAT GCACCTGGCG TCGGACGTGA CCGGGGTCCT CGACCGGGAC
GCCACGCCGT CGTCGCTCGC GCTCGCCGCG GCGCTCCACC CGTCGGCCGC GGTGTGCGGG
ACGCCGACGG TGCCCGCGCG CGACCTCATC CGCGAGATCG AGGGCATGGA TCGCGGGCGG
TACGCCGGCC CCGTCGGGTG GACGGGTGCC GACGGCGACG GTGAGTGGGG CATCGCGCTG
CGCTCCGCCC GGCTCGACGA CGCCGACCCG CGACGGGTGC GACTCTTCGC GGGCTGCGGC
GTCGTGGCGG CGTCGGACCC GGCCGCCGAG CTGGCCGAGT CGGAGGCCAA GCTGGTCCCG
ATGCGCTGGG CCCTGCGCGG CTGA
 
Protein sequence
MSGSALPQPA FPAGSAPDGG RAVGAQPLVV RTAPISLPDG GLTTLVDLLP DAKPLAWVRR 
GDGIVGWGEA LRITTTGEAR FSDADAAWQS LLDRAVVRDD VRLPGTGPVA FGSFAFDATS
DDGGVLVVPR VVVGRRGDRA WITTIAAGLD AAPTAALLDP ARRTPVTGPG AVTESDGAVA
AADWPAIVAD AVERIQAGRL EKVVLARDVV ATTGRALDPR WLLRRLAAGY EATWTFSVAG
MVGATPELLV RSEKGLVASR VLAGTIRRAP GMTDDDALLH AAQLARSSKD LEEHEHAVVS
VARALEPFCT SMNVPEQPFV LHLPNVMHLA SDVTGVLDRD ATPSSLALAA ALHPSAAVCG
TPTVPARDLI REIEGMDRGR YAGPVGWTGA DGDGEWGIAL RSARLDDADP RRVRLFAGCG
VVAASDPAAE LAESEAKLVP MRWALRG