| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0248 |
|---|
| Symbol | |
|---|
| ID | 8647748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 294612 |
|---|
| End bp | 296024 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | putative signal transduction histidine kinase |
|---|
| Protein accession | YP_003324845 |
|---|
| Protein GI | 269955056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGG TCGCGACGGT GGCAGCACGT TCCGCCCTGG TACTGGCCGG GGTCGTCGCG
GCGCTGGTAG CCAGCGTCGT CGCCCATGGC TGGGAGGGCT CGCTTCTCGT CCCGGACCTC
GTGGCGGCGA TCGCCTTCGT CGTCCTCGCC GCCCGCGCGT GGCCCGACGG ACGACCGACG
TTCTGGCTCG CGCTGGCGTT CACCGTCGCC TGGATCGCCG GGACTCTCGT CGCGTACGGG
CTGTACTGGC ACCGCGGGTT CCTCGTGCAC TTGCTGCTGA GCTTTCCGCG GGCGTGGCCC
GGCCGACGGC TGCATCGTCT TGCGATCGCC GGTGGGTACG CCGCATCAGT CACGCCGTTC
GTCTGGAGCA GCGACGCAGC GGCCGTCGTG CTGGCGGCAG CTCTCGCGAG CGTGGCGGCG
TTCTCCTGGC AGGGGGATCG CCCCGGCCGC GTGGTGCGAT GGTGCTCGTT GGCGTTCGCC
GTCGTCGTCG TCGTCGGCTC CGGGGCCAGG TCGGTCGTTC CTCAGGGCCG GGCCGTCGAG
CCCGTGTTCT GGGCCTACGC TCTCGTGGTC ACGGCGACGG CTGTCGTGCT GGGGCTGGGG
CTTCGCCGAG CGGACCCGGC CCGAGTTGCC GACCTCGTCG TCGAGCTGGG CGGGTTGACG
GGGCGAGACG ACGCGACCGC CTCCGTCGCG AGGTCGCTCT CCGACGTTCT CGGAGCCCCG
GTCGCGGAAG ACGATCCGCT CGTCGCGCGC ACCGTCGACA TCGCCCGGCG GATGACCGCG
ACCCATCGCG CACTCGAGGA CGAGACGCGT CGGCGGCTCG GGGAGGTCGA GGCGTCTCGG
CGTCGACTGC TCGCGGCAGG TGACGACGAG CGCCGGCACC TCCAGGAGCG CCTGCAGCAG
CAGGTGATCG AGCCGTTGGG GGAGCTCGAG CGTCGGATCC GGGACAGCCC GACCGGCGCG
GGAGCGAGCC TCGATGGGGC TGGCGCCCTC GTTCGCCGCG CGATCGGCGA GGTCGGCGAG
ACCGCCGCGG GGCTGGGGCC CAGGGCGCTC GAGGCCGGGC TCGAGGCCGC CCTGCGCCCA
CTGACCGTGA GCGGGCCCGT GTCCGTCCAC CTGTCGATCG TCGCGGAGCG CTTCGCGCCG
GAGATCGAGG CGGCGGCCTA CTACGTCTGC GCCGAGTGTC TCGTCAACGC CTTCAAGCAC
GCCGGGGCGG CCACGGTGGT GATCGTCGCG AGGCGCGACG GGAGCCGGTT CGAGGTGTCG
GTCTCGGACG ACGGCGCAGG TGGCGCCGAC CTCGACGCCG GCTCCGGGCT GCGGGGCTTG
CGGGACCGCG TCGACTCGCT CGGCGGAGGA GTCGAGATCG TGTCGCCGCC CGGTGCGGGG
ACGACGGTTC GGGCCTGGAT GCCGGTGTCG TGA
|
|---|
| Protein sequence | MPAVATVAAR SALVLAGVVA ALVASVVAHG WEGSLLVPDL VAAIAFVVLA ARAWPDGRPT
FWLALAFTVA WIAGTLVAYG LYWHRGFLVH LLLSFPRAWP GRRLHRLAIA GGYAASVTPF
VWSSDAAAVV LAAALASVAA FSWQGDRPGR VVRWCSLAFA VVVVVGSGAR SVVPQGRAVE
PVFWAYALVV TATAVVLGLG LRRADPARVA DLVVELGGLT GRDDATASVA RSLSDVLGAP
VAEDDPLVAR TVDIARRMTA THRALEDETR RRLGEVEASR RRLLAAGDDE RRHLQERLQQ
QVIEPLGELE RRIRDSPTGA GASLDGAGAL VRRAIGEVGE TAAGLGPRAL EAGLEAALRP
LTVSGPVSVH LSIVAERFAP EIEAAAYYVC AECLVNAFKH AGAATVVIVA RRDGSRFEVS
VSDDGAGGAD LDAGSGLRGL RDRVDSLGGG VEIVSPPGAG TTVRAWMPVS
|
|---|
| |