Gene Xcel_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0239 
Symbol 
ID8647739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand- 
Start bp283877 
End bp284569 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003324836 
Protein GI269955047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACGG TGGTCCTCGC TGATGACCAC GAGCTCGTCC GTTCGGGTCT GAGGCTCATC 
CTCGAAGCGC AGGACGACAT CCAGGTCCTG TCAGAGGCCG CAGACGGTGA AGCCGCGCTG 
CGCGAGGTGC GACGGCTTCG ACCGGATGTA GCACTGCTCG ATATCCAGAT GCCACGTATG 
TCAGGGCTGG AGGTCGCCCG CGCCGTCGTG GCGGACACCA CCGCGCACAC ACGGGTGGTC 
ATGCTCACGA CGTTCGACCG TGACGACTAC CTCTACGACG CGCTGGTCGC CGGGGCGAGC 
GGGTTCATGC TGAAGTCCTC ACCTCGGGCA CACCTGCTTC ATGCGGTACG CACCGCAGCG 
TCCGGGGAGG CTCTGCTGGA CCCGAGCCTG ACGCGACGCC TCGTGGAGAG CCACGTGCGT 
CGGCCGCGGG CCGTGGAACC AGGGCAGACA CCTGCGCAGC TGGCGGGGCT GAGCCCACGG 
GAACGTGACG TGCTCCAGGC CCTGGCCCGG GGGGAGTCCA ACGCGGAGAT CGCCGGCACC 
CTCTTCCTCG CCGAGACGAC CGTGAAGACC CACGTCGCCG CGGTGCTGCG CAAGCTCGGC 
CTGCGTGACC GCACGCAGGC GGTCATCCTC GGCTACGAGA TCGGCCTCGT CGTCCCCGGT 
GACAACGCTC CCGGTGGACC GCGGCGGGTG TAG
 
Protein sequence
MITVVLADDH ELVRSGLRLI LEAQDDIQVL SEAADGEAAL REVRRLRPDV ALLDIQMPRM 
SGLEVARAVV ADTTAHTRVV MLTTFDRDDY LYDALVAGAS GFMLKSSPRA HLLHAVRTAA 
SGEALLDPSL TRRLVESHVR RPRAVEPGQT PAQLAGLSPR ERDVLQALAR GESNAEIAGT 
LFLAETTVKT HVAAVLRKLG LRDRTQAVIL GYEIGLVVPG DNAPGGPRRV