| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0178 |
|---|
| Symbol | |
|---|
| ID | 8647677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 212897 |
|---|
| End bp | 214057 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter, periplasmic binding protein, thiB subfamily |
|---|
| Protein accession | YP_003324775 |
|---|
| Protein GI | 269954986 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCCACG AGACACCGCG CACCCGTCAG ACCCCGCGCA CCCGTCAGAC ACCGCGCACC
CGTCAGACCC CGCGTGCCGG TCACACGCTG CGCACGCGCG CCGCGGCCGT CGTCGTCGTC
GGGCTGCTGC CTGCGCTGGC GGCCTGCGGA TCGGGGGAGA CGCCGGGTGC CGACGCGAGC
GAGCCGGCGC CGTCGAGCAC GGTCACCCTG GTGACGCACG ATTCCTGGGC CGTGTCGGAG
GAGGTCGTCG CGCAGTTCGA GGCGGAGAGC GGCTTCACGG TGAAGCAGGT GCCGATGGGT
GACGCGGGCA CGCTCGCCAA CCAGGTGGTG CTGACGAAGG ACTCGCCGCT GGGCGACGTC
GTCTTCGGCA TCGACAACAC GTTCGCGTCC CGGGTCGTCG ACGCCGGGGC GCTCGAGCCC
CACACCCCGG CCGGGCTGCC GGCGTCCGCG GTTCCGCTCG TGCTCGGCGA CGGGGCGCTG
ACCCCGGTGA CCGTCGGCGA CGTGTGCGTC AACACGGACG CGGCATGGTT CGAGGCGGAG
GGCATCGCCG AGCCGGAGAC GCTCGAGGAC CTGACCGAGC CGGAGTTCCA GGACCTCATG
GTGGCGCTGA ACCCGGCGTC GTCGTCGCCG GGCATGGCGT TCCTGCTGGC CACGATCGGG
GCGTTCGGGG ACGACGGCTT CGGTGGCGAG GGCTGGACGG GGTACTGGGC CGCGCTGCGC
GCCAACGGGC TGCGGATCAC CGACTCGTGG TCGGACGCCT ACTACGCGGA GTTCTCGGGC
GGCGGTGAGG GCGGCACCCG CCCGATCGTC GTGAGCTACT CGACGTCCCC GGCGTTCACG
ACGACGGAGG ACGGCTCGGC GTCCACCACC CGCGCCCTGC TGGGCACCTG CTTCCGTCAG
GTCGAGTACG CGGGCATCCT GGCCGGTGCC GCGAACCCGG AGGGTGCCCG CGCGCTGGTC
GACTTCCTCG TCTCGGAGCC GTTCCAGGCC GACGTGCCGG GTCAGATGTA CATGTACCCG
GCGGACTCGT CCATCGAGCT GCCCGAGGAG TGGCTGCGCT TCGCCCCGCT GTCGGACTCG
CCGTTCGACG TTCCCCCGGC CGACATCGCC GCCCACCGTG AGGCCTGGCT CGACGCCTGG
ACCGCTGCGG TCGGCGCCTG A
|
|---|
| Protein sequence | MTHETPRTRQ TPRTRQTPRT RQTPRAGHTL RTRAAAVVVV GLLPALAACG SGETPGADAS
EPAPSSTVTL VTHDSWAVSE EVVAQFEAES GFTVKQVPMG DAGTLANQVV LTKDSPLGDV
VFGIDNTFAS RVVDAGALEP HTPAGLPASA VPLVLGDGAL TPVTVGDVCV NTDAAWFEAE
GIAEPETLED LTEPEFQDLM VALNPASSSP GMAFLLATIG AFGDDGFGGE GWTGYWAALR
ANGLRITDSW SDAYYAEFSG GGEGGTRPIV VSYSTSPAFT TTEDGSASTT RALLGTCFRQ
VEYAGILAGA ANPEGARALV DFLVSEPFQA DVPGQMYMYP ADSSIELPEE WLRFAPLSDS
PFDVPPADIA AHREAWLDAW TAAVGA
|
|---|
| |