| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0090 |
|---|
| Symbol | |
|---|
| ID | 8647585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 98337 |
|---|
| End bp | 100238 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | asparagine synthase |
|---|
| Protein accession | YP_003324689 |
|---|
| Protein GI | 269954900 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGTCG TCGTCGTGCC CGATACCCCC CTTCCCCCCG GGATGGCGGC CGACCTCGTC
GACCGCGTCG GCCCGGTCCT GTTCCGCCAC CGGTCGGGCC GGGCGTGGAT CCTGGGGACG
ACGGACGGAC GACGGGTCGT CCGGGCCCGG ACCCGGTTCG TCGACGTCGT CCTGCTGGGC
GACGGCTCGC ACGAGACGGA CGAGGCGGCG CTCGCCACTG CGGTCGCCGA CGCACGCTCG
GTCGACGGGG TGCCCGCCGA GCGTTTCACC GAGGCCGACG TGCTCCTCTT CGCCCGCAGC
GACGGCCGCA TGCGCTCCCA GGCACCCCCG TTCCTGACGC GGTCCCTCTG CTGGACCACC
GTCGACGACG TCCCCGTGAT CTCGGACGAG CAGCTCACGC TGCAGCGGCT CGCGGATCTC
GCCCCCGACG TCGACGTGCT GGCGAGCCGG CTGACGGACG GCGAGATCAG CGTCCCCTTC
GGTCTGCGCA GCGTGTGGTC AGGGCTGCAT CCGCTGCGCC CCGGCCAGTG GCTCGACTCC
CGCGCCCGGG AGGCTCCCCG GCCGGTGACG TGGTGGCGGC CGCCGCGGCC CGAACGATCC
CTCGACGACC TGTCGGGGGA GCTGTCCGAC GCCCTGTCCG CCGCGCTGCG CACCCGCCTC
GGAGCACACC GCGAGGTCAG CGCCGACCTC TCCGGCGGGC TCGACTCCAC CACGCTCAGC
TTCGTGCTTG CCGACGTGCT GGACCGCCCG CACCACACCC TGTTCCTGGC GTCGGACAAC
GTCGCGAACG GTGACCGACC GTGGGCCGCA CGTGCCGCCG AGGAGCTGGG CACCCGTCAC
GTCGTCGTGC CGTACCGGTC GGTGCTGCCG CAGATCACGG ACGCCGCGGC CGGGACGATC
GACACCGCCC CGGAGGGCCC GAGCATCGCC TCGGTGTCCG CGGCCGCCGT GCCGCTGATC
GAGGAGGTGC TCCGCGGGAC CGGCTCGACG CTGCACCTCA ACGGCCACGC GGGGGACGCG
CTCTTCGGGC CCGTGTCGAC GGTGCTCTGG TCGCTGGCCC GCTCCCGTGC GAAGGGCCGG
TGGCGCCAGC TGTGGCGGCA GCGGCTGGTC AACCGGTACC CGCTCGGCGC GACCGTGCGG
ATGCTGGCCC AGCGCGGCAC GTACCGCGAC GACCTCGAAC GGTTCGCCCG GGACGACTTC
CGGCAGCCCG AGGACGAGCT GGCCACCTAC GCGCGCTGGG CAGCGCTGCC ACGGGTGCAT
CCGGCCCTCA CCGACGCCGC CCGCGAGCAC GTGCGGAACC TGGCCCGGCG CGAGCTGGCC
GAGGGGCACG ACGGCTACGG CGCCGACCGC ACCGTCCACC AGATCGTCCA CTTCCTCACG
GTGCACGGCG CCGACGTCCG CCGCATGAAC CACGCCCGCA CCCCCGGCGC CGCGGTGACG
TTCGACAGCC CGCTCCTCGA CCGCCGGGTC GTCGAGGCCG CACTGGCGCT GCGCATCGGC
GACCGGGCAC GCCAGTACCC GGTCAAGCCG CTGCTCGCCG CCGCCCGCCC GCCGCGGATG
GCCATCGACT ACTTCACGCG GTCGGACAAG GGCGACTACA CGGCGGAGGT CTTCGAGCAG
CACCGGGCGA TCGCCCCCAC GGTGCGCGAG CTGTTCGCCG ACGGCTCCGT GCTGGAGGAC
CTGGGTCTGG TCAGCGGCGA ACGGGTCCTG CGGTCCGTCA CCCAGTTCTC GGTGGACGGG
AGCGAGTACC GCGACCTCGA CCAGATCGTC TTCACCGAGC GGTGGCTGCG GTCGCTCCCC
GCCGGGCAAC CCGCCGGGCA ACCCGCCGGG CAGCCCGCCG GGCAGCCCAC GGCGTCCGCG
GACCCGCGTC ATCGAGAAGG GGAGCACGCA CCATGCGCCT GA
|
|---|
| Protein sequence | MPVVVVPDTP LPPGMAADLV DRVGPVLFRH RSGRAWILGT TDGRRVVRAR TRFVDVVLLG
DGSHETDEAA LATAVADARS VDGVPAERFT EADVLLFARS DGRMRSQAPP FLTRSLCWTT
VDDVPVISDE QLTLQRLADL APDVDVLASR LTDGEISVPF GLRSVWSGLH PLRPGQWLDS
RAREAPRPVT WWRPPRPERS LDDLSGELSD ALSAALRTRL GAHREVSADL SGGLDSTTLS
FVLADVLDRP HHTLFLASDN VANGDRPWAA RAAEELGTRH VVVPYRSVLP QITDAAAGTI
DTAPEGPSIA SVSAAAVPLI EEVLRGTGST LHLNGHAGDA LFGPVSTVLW SLARSRAKGR
WRQLWRQRLV NRYPLGATVR MLAQRGTYRD DLERFARDDF RQPEDELATY ARWAALPRVH
PALTDAAREH VRNLARRELA EGHDGYGADR TVHQIVHFLT VHGADVRRMN HARTPGAAVT
FDSPLLDRRV VEAALALRIG DRARQYPVKP LLAAARPPRM AIDYFTRSDK GDYTAEVFEQ
HRAIAPTVRE LFADGSVLED LGLVSGERVL RSVTQFSVDG SEYRDLDQIV FTERWLRSLP
AGQPAGQPAG QPAGQPTASA DPRHREGEHA PCA
|
|---|
| |