Gene Xcel_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0088 
Symbol 
ID8647583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp97026 
End bp97922 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003324687 
Protein GI269954898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTACCC GTTCCACCCT GCCCGTCGCG CTCGTCGCCG TCGCGGCTCT CGCCCTGAGC 
GCCTGCTCGT CCGCCTCGCA GGACGGCGAC GCGGGCGCCA CCGGTGAGGC GTTCGACCTC
GCCAGCATCA CCAAGGACGC CGACATCGCC GCGCTCGTCC CGGCCGCGGT CGCCGAGGAC
GGCAAGCTCA CCGTCGGGTC CGACCTGACC TACGCTCCGG CCGAGTTCGT CGACACCGAC
GGCAAGACGG CGGTCGGCTT CGACATCGAC ATCATCCGGG CGGTCGCGAA CGTCCTGGGC
CTCGAGCTGG ACGTCCAGTC GGCCACGTTC GACTCGATCA TCCCCGCCGT CGGGACCCGC
TACGAGGTGG GTGTCTCGTC GTTCACGATC ACCCCTGAGC GTCTCGACGC CGTCTCGTTC
GTCAGCTACT TCGACGCCGG CTCGCTGTTC GCCGTCGCGG AGGGCAACCC GGACGGCATC
GACCCGGAGA ACCTGTGCGG TGCGACCGTC TCGGTGCAGA CGGGCACCAT CCAGCTCGAC
GCGCTCAACG CCGCGAACGA GACGTGCGAC GAGCCGATCA AGCTCCTCAC CTTCGAGTCG
CAGGCCGACG TGACCTCCAA CCTGGTCAAC GGCCGCGCCC AGGCCATGTA CGCCGACTCG
CCCGTCACGG GCTACGCCGT CCTGCGGGCC GACGGCGCCA TCGAACTCCT CGGTGAGATC
CACGACTCGG CGCCCTACGG CATCGTCATC CCGAAGGACG ACCTGGAGCT CGGCGAGGCC
CTCCGTGCGG CACTGCAGAA GCTCATGGAC GACGGCACCC TCGCGCAGGT CGCCGGCGCC
TGGGGCCAGG CCGAGGGCGT GCTGGCCACG GCGGAGATCA AGACCGCGGC CGGCTGA
 
Protein sequence
MRTRSTLPVA LVAVAALALS ACSSASQDGD AGATGEAFDL ASITKDADIA ALVPAAVAED 
GKLTVGSDLT YAPAEFVDTD GKTAVGFDID IIRAVANVLG LELDVQSATF DSIIPAVGTR
YEVGVSSFTI TPERLDAVSF VSYFDAGSLF AVAEGNPDGI DPENLCGATV SVQTGTIQLD
ALNAANETCD EPIKLLTFES QADVTSNLVN GRAQAMYADS PVTGYAVLRA DGAIELLGEI
HDSAPYGIVI PKDDLELGEA LRAALQKLMD DGTLAQVAGA WGQAEGVLAT AEIKTAAG