Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0088 |
Symbol | |
ID | 8647583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 97026 |
End bp | 97922 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003324687 |
Protein GI | 269954898 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTACCC GTTCCACCCT GCCCGTCGCG CTCGTCGCCG TCGCGGCTCT CGCCCTGAGC GCCTGCTCGT CCGCCTCGCA GGACGGCGAC GCGGGCGCCA CCGGTGAGGC GTTCGACCTC GCCAGCATCA CCAAGGACGC CGACATCGCC GCGCTCGTCC CGGCCGCGGT CGCCGAGGAC GGCAAGCTCA CCGTCGGGTC CGACCTGACC TACGCTCCGG CCGAGTTCGT CGACACCGAC GGCAAGACGG CGGTCGGCTT CGACATCGAC ATCATCCGGG CGGTCGCGAA CGTCCTGGGC CTCGAGCTGG ACGTCCAGTC GGCCACGTTC GACTCGATCA TCCCCGCCGT CGGGACCCGC TACGAGGTGG GTGTCTCGTC GTTCACGATC ACCCCTGAGC GTCTCGACGC CGTCTCGTTC GTCAGCTACT TCGACGCCGG CTCGCTGTTC GCCGTCGCGG AGGGCAACCC GGACGGCATC GACCCGGAGA ACCTGTGCGG TGCGACCGTC TCGGTGCAGA CGGGCACCAT CCAGCTCGAC GCGCTCAACG CCGCGAACGA GACGTGCGAC GAGCCGATCA AGCTCCTCAC CTTCGAGTCG CAGGCCGACG TGACCTCCAA CCTGGTCAAC GGCCGCGCCC AGGCCATGTA CGCCGACTCG CCCGTCACGG GCTACGCCGT CCTGCGGGCC GACGGCGCCA TCGAACTCCT CGGTGAGATC CACGACTCGG CGCCCTACGG CATCGTCATC CCGAAGGACG ACCTGGAGCT CGGCGAGGCC CTCCGTGCGG CACTGCAGAA GCTCATGGAC GACGGCACCC TCGCGCAGGT CGCCGGCGCC TGGGGCCAGG CCGAGGGCGT GCTGGCCACG GCGGAGATCA AGACCGCGGC CGGCTGA
|
Protein sequence | MRTRSTLPVA LVAVAALALS ACSSASQDGD AGATGEAFDL ASITKDADIA ALVPAAVAED GKLTVGSDLT YAPAEFVDTD GKTAVGFDID IIRAVANVLG LELDVQSATF DSIIPAVGTR YEVGVSSFTI TPERLDAVSF VSYFDAGSLF AVAEGNPDGI DPENLCGATV SVQTGTIQLD ALNAANETCD EPIKLLTFES QADVTSNLVN GRAQAMYADS PVTGYAVLRA DGAIELLGEI HDSAPYGIVI PKDDLELGEA LRAALQKLMD DGTLAQVAGA WGQAEGVLAT AEIKTAAG
|
| |