Gene Xcel_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0087 
Symbol 
ID8647582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp96099 
End bp96983 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content72% 
IMG OID 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003324686 
Protein GI269954897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACTC GTCCCGCCCT CCTCGTCGCG ACCGCCGTGG CTGCGACGCT CACCCTCGGC 
GCCTGCACGT CGGCGTCCCA GGACCAGGGC GGCAGTGCGC CGAGCGCCGC CGCCACCGTC
GTGAAGGACG AGGCCATCGC CGCGCTCGTG CCGGCGGCCG TCGCCGCGGA CGGCAAGCTG
ACCGTCGCGG CCGAGCTGTC CTACGCCCCG CTCGAGTTCG TCGACGCCGA CGGCAAGACG
CCGGTGGGCC TCGACATCGA CATCGCGACC GCGATCGCCA CCGTCATGGG GCTCGAGGTG
GACGTCCAGT CGGCCCAGTT CGACTCGATC ATCCCGGCCA TCGGCACGCG GTACGAGGTG
GGCGTCTCGG CGTTCACGAT CACCCCCGAG CGCCTCGAGA CCGTCACGAT GGTCAGCTAC
TTCAGCGCCG GGTCACAGCT CGCGGTCCAG GCCGGCAACC CGGACGGCGT CGACCCGGAC
GACCTGTGCG GGCTCACCGT CGGCGTCCAG ACCGGCACCG TGCAGCAGGA GGAGCTCGAG
GAGCTGAGCG CCGCCTGCGA GACGCCCATC GAGATCCTCC CGTACGACTC GCAGGCCACC
GTCACCGCGA ACCTGGTGGG CGGCAAGCTG CAGGCCATGT ACGCCGACTC GCCCATCACG
GCCTACGCCG TCGAGCAGGC CGACGGCGCC CTTGAGACGC TCGGGGAGAT CCGCGACGCC
GCCCCCTATG GTGTGGTCGT CGCGAAGGAC GACCCGGAGC TGGCCGAGGC CGTGCGGGCC
GCGCTGCAGC AGCTCATGGA CGACGGCACG CTGGCCGAGA TCGCCGCTCA CTGGGGCAAC
GAGGCCGGCG CCCTGACCAC CGCCGAGATC AACCCGGCCG TCTGA
 
Protein sequence
MRTRPALLVA TAVAATLTLG ACTSASQDQG GSAPSAAATV VKDEAIAALV PAAVAADGKL 
TVAAELSYAP LEFVDADGKT PVGLDIDIAT AIATVMGLEV DVQSAQFDSI IPAIGTRYEV
GVSAFTITPE RLETVTMVSY FSAGSQLAVQ AGNPDGVDPD DLCGLTVGVQ TGTVQQEELE
ELSAACETPI EILPYDSQAT VTANLVGGKL QAMYADSPIT AYAVEQADGA LETLGEIRDA
APYGVVVAKD DPELAEAVRA ALQQLMDDGT LAEIAAHWGN EAGALTTAEI NPAV