Gene Xcel_0074 details

Gene Information

• Locus tag: Xcel_0074
• ID: 8647569
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: -
• Start bp: 78585
• End bp: 83459
• Gene Length: 4875 bp
• Protein Length: 1624 aa
• Translation table: 11
• GC content: 73%
• Product: ATP-dependent helicase HrpA
• Protein accession: YP_003324673
• Protein GI: 269954884

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.292944
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACCG CACCAGCCGC ACCACAGCCG CCGTCGCCCG ACGACGACGG CCGGCGTCGT 
GACGGCGGAC GCCGTCGGCG AGGTCGACGC GAGGGTCAGC GCGACCCACG GCGCGGCCCT 
GAGGGCGCCG GCCAGCGCGG CCCTCAGCGC ACCGGCCAGC GCGGCCCACG CCGCGTCTCG 
CGGGCGCACC TGGACAAGCT GGCCGCCACC CGCACCGCCG TCGTCGTGCC CCCCATCACC 
TATCCGGAGC AGCTGCCCGT CAGCGCACGC CGGGAGGACA TCGCGACGGC GATCCGCGAG 
AACCAGGTCG TCGTCGTCGC GGGCGAGACG GGATCCGGCA AGACGACGCA GCTGCCGAAG 
ATCCTGCTGG ACCTCGGCCG CGGGCGGGCC GGGCAGATCG GCCACACGCA GCCGCGGCGC 
ATCGCGGCAC GCAGCGTCGC CGAGCGCATC GCCGAAGAGC TGAGGACCAC ACTCGGGGAG 
ATCGTCGGCT ACCAGGTGCG GTTCACGGAC CAGTCGAGCG AGCAGACCCT CGTCAAGGTG 
ATGACGGACG GCATCCTGCT CGCGCAGATC CAGCGGGACC CGGAGCTGCT CGCCTACGAC 
ACGATCGTGA TCGACGAGGC GCACGAGCGG TCGCTCAACA TCGACTTCCT GCTCGGGTAC 
CTCTCGCGGC TGCTGCCGCG CCGGCCCGAC CTCAAGGTGA TCATCACCTC CGCGACCATC 
GACTCGCAGC GGTTCGCGGA GCACTTCTCG CCATCGCACC TGGCGGCGCT GGGCGGGGCT 
CCCGAGGCCG TCGTCGACGT GCTGCCGAAG GCGGCGCCCG TGGTCGAGGT GTCGGGGCGC 
ACCTACCCGG TCGAGATCCG GTACCGGCCG CTCGTCCCCG AGGTCAGCGA GAACGGGCTG 
CAGAAGAAGG GCGAGGAGAG AGACCTCGTC ACCGGCATCA TCGAGGCCTG CGACGAGCTC 
ATGCGCTGCG GACCGGGGGA CATCCTCGTG TTCCTCTCGG GCGAGCGGGA GATCCGCGAC 
GCGCTCGACG GGCTCGAAGG GCATCTCGGT GCGCGCGCTC GCGACCCGCG GCACCCGCAG 
CACGTCGAGA TCCTGCCGCT GTACTCGCGG CTCTCGGCCG CCGAGCAGCA CCGCGTCTTC 
GCCGCACACC CCGGCCGGCG CATCGTGCTG TCGACCAACG TCGCCGAGAC CTCGTTGACC 
GTCCCCGGCA TCCACTACGT CGTCGACACC GGCCTGGCGC GCATCTCGCG CTACTCCAAG 
GCCACCAAGG TGCAGCGCCT GCCGATCGAG GCGATCTCGC AGGCGTCCGC GAACCAGCGG 
TCCGGGCGGT CCGGGCGCGT GGCCGACGGC GTCGCCGTCC GCCTGTACTC CCAGGCCGAC 
TTCGAGGCCC GCCCCGAGTA CACCGAGCCC GAGATCCTGC GGACCTCGCT CGCGTCGGTG 
CTGCTGCAGA TGATCGCCGT CGGCGTCGTC GAGAGCCCTG ACGAGATGGC CCGGTTCCCG 
TTCGTCGAGA AGCCGGACAC GCGCGCGGTC CGCGACGGCG TGATGCTGCT GCGCGAGCTC 
GGCGCCCTGG AGACAGTGGT AGAGCCGACC CCCGCGGTGG TAGAGCCTGT CGAAACCACC 
CCCAGCCCGG TGGTTGAACC CCCCAGCCCG GTGGTTGAGC CTGTCGAAAC CACCCCACCG 
CCGTCGGACG TGGTTTCGAC AGGCTCAACC ACCGGGGGTC GGACCTCGAC CACCGGTGCG 
GGCCGCACGA CGACGCGGCT GACCACCGTC GGACGGCAGC TCGCCCAGCT GCCGATGGAT 
CCACGGCTGG CACGCATGAT CATCGAGGGC GCCCGGCGGG GTGCGGCCCG CGAGGTCGCC 
GTGATCGCGG CGGCGCTGTC GGTGCAAGAC CCCCGCGAGC GCCCCGCCGA GGTCCGCGAG 
CGTGCCGACC AGCTCCATGC CCGGTTCGCG GACCCGACGT CGGACTTCCT GAGCTACCTC 
AACCTGTGGG AGTACCTGCG CGACCAGCAG CGCGACCTGT CCGGGTCGGC GTTCCGGCGC 
CTGTGCAAGG CGGAGCACCT CAACTACCTG CGCGTGCGCG AGTGGCAGGA CGTCGTCGCG 
CAGCTCCGGC AGATGGCGAA CGAGCTGGGC ATCAACCTGT CCTCGCGCGC TTCGGTGGTT 
GAGCCTGTCG AAACCACCCC GCGGGTCGAC GGCGGGGTGG TTTCGACAGG ATCGACCACC 
GCGGAAGGCG CCGACGACGG TCAGCCCCGC AGCGGTGAGT GGCGGCGCGT GTGGGACGGC 
GACACCATCC ACCGCGCGCT CCTGGCCGGT CTGCTGTCCC AGGTGGGCAT GCAGGACACC 
GGCGAGATCA AGGCCTCCTC GGTCGCCCAC CTCAAGGGCG AGGCGCGGGC TCGTGCGCTG 
CGGCAGCAGG CCAAGCGGGT GCGCAACGAG TACCTGGGCG CGCGCGGGGC GAGGTTCGCG 
ATCTTCCCCG GCTCGCCGCT GTCGAAGAAG CCGCCGGCGT GGGTCATGGC GGGCGAGCTG 
GTGGAGACCT CGCGCCTGTG GGCGCGGGAC GTGGCGCGCA TCCAGCCCGA GTGGGCCGAG 
GAGCTCGCGG GCGATCTCGC GCGCCGCACC TACTCCGACC CGCACTGGTC CACCAAGCAG 
GGCGCCGCGA TGGCCACCGA GAAGGTGCTG CTGTACGGCG TCCCCATCGT CAGCGACCGG 
CCGGTGCTGT TCGCCCGCGT GGACCCGGAA GCGGCCCGGG AGATGTTCAT CCGGCATGCG 
CTGGTGCAGG GCGAGTGGAC CACGCACCAC ACGTTCTTCG CCGAGAACCG CCGTCTGCTG 
GAGGAGGCCG AGCAGGTCGA GGCCCGTTCC CGGCAGCGCG GCCTGGTCGC CTCCGAGGAC 
GACCTGTTCG CCTTCTACGA CGAGCGTGTC CCCGCGTCCG TCGTGAGCGC GCGGCACTTC 
GACCAGTGGT GGTCGCGCGC CCGGCGCGAG ACCCCGGACC TCCTGACGTT CCGCCTCGAG 
GACCTCGTCG ACGTCGACGC CGTGGACCCG TCGCAGTTCC CGTCGTCGTG GACGCAGGGC 
GAGCTCACCC TGCCGCTGAC CTACCAGTTC CGCCCCGGGT CCGACGCCGA CGGCGTCACC 
GTGCACGTGC CGCTCTCGGT GCTGCCGCGG CTCTCGCCGT CGGGCTTCGA CTGGATGGTG 
CCCGGACTGC TCGAAGAGCT GTGCGTCGCC ACGATTCGCT CCCTTCCCAA GGCCGTACGC 
GTGCAGCTCG TGCCCGCGCC CGACGTCGGG AACGCCGTCG CGGGCTGGCT GCGGCAGAAC 
ACGCCGACGT GGGAGGACAT GGCCCGGGCG GGTGACATGG CCGAGCCCTT CCACGTGGCG 
TTCACGCGCG CGGTGCGTGC GCTGCGCGAC GTCGTCGTGC CCGGCGACGC CTGGGACACC 
GAACGGGTCG AGCGCCTGCC CGCACACCTG CGCATGACCT TCCGCGTCGT GGAGTCCGGT 
GTGAAGTCCG GCGGGCCGAC GACGGCGGCG GGCTCCCGCG GAAGCGGTCG TGGTGGGCGA 
GGGCGCGGCC GGGACGGCCG GGGTTCCCCG AGCGCCGCGG CTGCCGTCTC GCCGTCGGGC 
ACGGGCGCGG CGGGTGCTGC CATCGACGAG TCGAAGGATC TCCTCGCGCT GCAGCGACGC 
CTTGCCCCGA AGGCGGAGGC GGCGGTACGC GCCGCGGTCA AGGGCGCGGT CGCGGTCGCC 
CTGGAGGAGG CCCGCTCGCG CACGGCGGCC CTCTCGGCGG GTGGCTCTGC TGAAGCCAAC 
CCCTCGGTGG TTGAGCCTGT CGAAACCACG GGTCGGCGCG TGGTTTCGAC AGGCTCAACC 
ACCGGAGGAG GCGGCTCAAC CACCGGAGGA GGCGGCTCAA CCACCGGAAG GCCGGGAGGC 
TCGACCACCG GAGGCGGCCG CGGGGTGGTC GCCGAGCGGC TCGGGCTGGC CACGTGGCCG 
GACGGGCTCC CCGACGGGCG GCTGCCCGAC GTCGTCTCGA CGGATCTGGG CGGAGGAGTC 
GTCGTGCGCG GCTATCCGGC GCTCGTCGAG GAGCCGGGAC CGAAGCAGGA ACCCACGGTC 
GCGCTGCGCA TCCTGGCCGA TGCGCTGGAG CAGCCGGCGA CGCACGCGCG CGGGGTGCGG 
CGGCTGTTGC TCGCCGAGAA CCGGCTCACC GCGGGGCGGG TCACGTCCCG GTGGAGCGGC 
ACGCAGGCGC TCACCCTCGC TGCGAGCCCG TACCGGAACA CGAACCTGCT CGCCGAGGAT 
CTGCAGCTGG CCACTGTCAT GGCGCTGACC AGCCCTGCCG CGGACCTCGC CCCCGGAACT 
CCGGCAGGGC CGCACGCCGT ACAGATCCGC GATGCCGAGT CGTACAACGC CGCGAAGGCG 
CACGTCCGCA CGCACCTCGA GGACGAGACC TACCGGGTCG CGGGTCATGT GGTCGCGGCG 
CTGACCGCCT GGCGGACCCT GGAGTCCGAG GTCCGCAAGA CGTCCTCGCT CGCCCTGCTC 
AACACGCTGC AGGACATCCG CGAGCACGCG GCCACGCTCA TCCACGACGG TTTCGTCAGC 
GCTACCCCGC CCCGTCGGCT GCCGCACCTG GTCCGCTACC TGCGGGCCGC GTCGTACCGG 
CTGGAGAAGG CGCAGGCCTC CCCGCACCGC GACGCCGAGC TGGCCTGGCG GATCCACGAC 
GTCGAGGAGG CGTACGCGAA GGCGCGCGCC GCCTACGCCG CCGGCCCGGC GGACGCCGCC 
CGGGCCGCCG AGCTCGCCGA GGTCCGCTGG CTGATCGAGG AGCTGCGTGT GTCCCTGTTC 
GCCCAGCAGC TCGGCACCGA CGGCACCGTC TCGGAGAAGC GCATCCGCAA GACTTTGGCC 
CCCAATGGCT GGTGA 

 

Protein sequence

MSTAPAAPQP PSPDDDGRRR DGGRRRRGRR EGQRDPRRGP EGAGQRGPQR TGQRGPRRVS 
RAHLDKLAAT RTAVVVPPIT YPEQLPVSAR REDIATAIRE NQVVVVAGET GSGKTTQLPK 
ILLDLGRGRA GQIGHTQPRR IAARSVAERI AEELRTTLGE IVGYQVRFTD QSSEQTLVKV 
MTDGILLAQI QRDPELLAYD TIVIDEAHER SLNIDFLLGY LSRLLPRRPD LKVIITSATI 
DSQRFAEHFS PSHLAALGGA PEAVVDVLPK AAPVVEVSGR TYPVEIRYRP LVPEVSENGL 
QKKGEERDLV TGIIEACDEL MRCGPGDILV FLSGEREIRD ALDGLEGHLG ARARDPRHPQ 
HVEILPLYSR LSAAEQHRVF AAHPGRRIVL STNVAETSLT VPGIHYVVDT GLARISRYSK 
ATKVQRLPIE AISQASANQR SGRSGRVADG VAVRLYSQAD FEARPEYTEP EILRTSLASV 
LLQMIAVGVV ESPDEMARFP FVEKPDTRAV RDGVMLLREL GALETVVEPT PAVVEPVETT 
PSPVVEPPSP VVEPVETTPP PSDVVSTGST TGGRTSTTGA GRTTTRLTTV GRQLAQLPMD 
PRLARMIIEG ARRGAAREVA VIAAALSVQD PRERPAEVRE RADQLHARFA DPTSDFLSYL 
NLWEYLRDQQ RDLSGSAFRR LCKAEHLNYL RVREWQDVVA QLRQMANELG INLSSRASVV 
EPVETTPRVD GGVVSTGSTT AEGADDGQPR SGEWRRVWDG DTIHRALLAG LLSQVGMQDT 
GEIKASSVAH LKGEARARAL RQQAKRVRNE YLGARGARFA IFPGSPLSKK PPAWVMAGEL 
VETSRLWARD VARIQPEWAE ELAGDLARRT YSDPHWSTKQ GAAMATEKVL LYGVPIVSDR 
PVLFARVDPE AAREMFIRHA LVQGEWTTHH TFFAENRRLL EEAEQVEARS RQRGLVASED 
DLFAFYDERV PASVVSARHF DQWWSRARRE TPDLLTFRLE DLVDVDAVDP SQFPSSWTQG 
ELTLPLTYQF RPGSDADGVT VHVPLSVLPR LSPSGFDWMV PGLLEELCVA TIRSLPKAVR 
VQLVPAPDVG NAVAGWLRQN TPTWEDMARA GDMAEPFHVA FTRAVRALRD VVVPGDAWDT 
ERVERLPAHL RMTFRVVESG VKSGGPTTAA GSRGSGRGGR GRGRDGRGSP SAAAAVSPSG 
TGAAGAAIDE SKDLLALQRR LAPKAEAAVR AAVKGAVAVA LEEARSRTAA LSAGGSAEAN 
PSVVEPVETT GRRVVSTGST TGGGGSTTGG GGSTTGRPGG STTGGGRGVV AERLGLATWP 
DGLPDGRLPD VVSTDLGGGV VVRGYPALVE EPGPKQEPTV ALRILADALE QPATHARGVR 
RLLLAENRLT AGRVTSRWSG TQALTLAASP YRNTNLLAED LQLATVMALT SPAADLAPGT 
PAGPHAVQIR DAESYNAAKA HVRTHLEDET YRVAGHVVAA LTAWRTLESE VRKTSSLALL 
NTLQDIREHA ATLIHDGFVS ATPPRRLPHL VRYLRAASYR LEKAQASPHR DAELAWRIHD 
VEEAYAKARA AYAAGPADAA RAAELAEVRW LIEELRVSLF AQQLGTDGTV SEKRIRKTLA 
PNGW