| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0062 |
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| Symbol | |
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| ID | 8647557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylanimonas cellulosilytica DSM 15894 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013530 |
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| Strand | + |
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| Start bp | 66387 |
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| End bp | 68048 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003324661 |
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| Protein GI | 269954872 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.3547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGT CGTCACCCTC CGCTCCCGAC CCGCACGCCT GGTGGCGCCA CGCGGTGATC
TACCAGATCT ACCCGCGCAG CTTCGCCGAC GGGAACGGTG ACGGCACGGG CGACCTTGCC
GGGGTGCGTG GCCGCCTTCC GTACCTCAAG GAGCTCGGCG TCGACGCCGT CTGGTTCACG
CCCTGGTACG TCTCCCCGCT CGCCGACGGC GGCTACGACG TCGCCGACTA CCGCGCGATC
GATCCCCAGT TCGGCACCCT CGCGGAGGCC GAGGCGCTCA TCACGGAGGC CGCCGCACTG
GGCATCCGGA CGATCATCGA CGTCGTCCCC AACCACGTCT CCTCCGCGCA CGCCTGGTTC
CAGGCCGCCC TGGCGTCCGA GCCCGGCTCC CCGGAGCGGG CCCGCTTCTG GTTCCACGAC
GGCCTGGGCC CCGACGGCTC CGGCATGCCC ACCCACTGGC AGTCCAGCTT CCAGGGCACG
ACGTGGACCC GCACGACCCG CCCGGACGGC ACGCCTGGCC AGTGGTACCT GCACCTGTTC
ACGCCCGAGC AGCCCGATCT CAACTGGGAG AACCCGGACG TCCGTCAGGA GCACCTCGAC
GTGCTGCGGT TCTGGTTCGA CCGCGGGGCC GCCGGCGTCC GCATCGACTC CGCGGCGCTG
CCGGTCAAGG ACCGCGCGCT GCCCGAGGTG CCCGAGATCC ACGGCCCGGG CGAGCACCCG
CACCTGGACC GCGACGAGCT GCACGACATC TACCGCACGT GGCGGGCCGT GGCCGACGGC
TACGACGACC CGCGGATCCT GGTGGGCGAG GTGTGGCTGC CGGACGCGGA GCGGTTCGCG
CAGTACCTGC GCCCCGACGA GATGCACACG GCGTTCAACT TCGACTTCAT GGTGCGCCCC
TGGGCCGCCG CCGCGATGCG CGAGTCCATC GACACCACGC TCGCCGCGCA CGCCCCGGTG
GACGCGCCCG CCACCTGGGT GCTGTCCAAC CACGACATCA CGCGCCCCGT GACCCGGTAC
GGCCGCGAGG ACTCGTCGTT CGACTTCGCG CGCAAGCGGT TCGGCATCCC CACCGACGTC
GCCGTCGGCA CGCGGCGGGC CCGTGCGGCC GCCCTGCTCA CGGGAGCGCT GCCGGGCGCC
CTGTACGTCT ACCAGGGCGA CGAGCTCGGC CTGCCCGAGG TCGAGGACCT GCCGCTCGAC
GTGCTCCAGG ACCCGATGCA CTTCCGCTCG AACGGCGTCG ACCCCGGCCG CGACGGCTGC
CGCGTGCCGC TGCCGTGGAA CCGCTCCGGG GCCTCGTACG GGTTCGGTCC GGAGCGCCCG
GGCTCGGACC GCGCCGAGAA GCCCTGGTTG CCCCAGCCGG TCTGGTGGGG CGAGTACGCC
GTCGAGGCCC AGGAGCACGA TCCCGCCTCG ATGCTGACGC TCTACCGCAC GATGCTGCGC
CTGCGGCGCA GCCTGCCCGA CCTGGCCGCC GGCGCCTTCA CCTGGATCGA GGACGCCGGC
GCCGACGTCC TCGCCTTCCG TCGCGGCGCG GGCTTCGCCT GCGTCGTCAA CCTCGGTGCC
ACGCCCGCCG CACGGCCCGA CGGCGAGATG CTCCTCGCCA GCGGGCCGCT CGCCCCGGAC
GGCGCGGTGC CGCACGACAC CGCCGTCTGG CTCCGGCTCT GA
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| Protein sequence | MTTSSPSAPD PHAWWRHAVI YQIYPRSFAD GNGDGTGDLA GVRGRLPYLK ELGVDAVWFT
PWYVSPLADG GYDVADYRAI DPQFGTLAEA EALITEAAAL GIRTIIDVVP NHVSSAHAWF
QAALASEPGS PERARFWFHD GLGPDGSGMP THWQSSFQGT TWTRTTRPDG TPGQWYLHLF
TPEQPDLNWE NPDVRQEHLD VLRFWFDRGA AGVRIDSAAL PVKDRALPEV PEIHGPGEHP
HLDRDELHDI YRTWRAVADG YDDPRILVGE VWLPDAERFA QYLRPDEMHT AFNFDFMVRP
WAAAAMRESI DTTLAAHAPV DAPATWVLSN HDITRPVTRY GREDSSFDFA RKRFGIPTDV
AVGTRRARAA ALLTGALPGA LYVYQGDELG LPEVEDLPLD VLQDPMHFRS NGVDPGRDGC
RVPLPWNRSG ASYGFGPERP GSDRAEKPWL PQPVWWGEYA VEAQEHDPAS MLTLYRTMLR
LRRSLPDLAA GAFTWIEDAG ADVLAFRRGA GFACVVNLGA TPAARPDGEM LLASGPLAPD
GAVPHDTAVW LRL
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