Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0052 |
Symbol | |
ID | 8647547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 56227 |
End bp | 57639 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | protein of unknown function DUF88 |
Protein accession | YP_003324651 |
Protein GI | 269954862 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.315794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAACG AAGAGCGCTT GGCCGTCTTC CTCGACTACG AGAACCTGGC GCTCGGTGCG CGTGAGCACC TCGGGGGCAT GCAGTTCGAC TTCGGCCCCA TCGCCGACGC CCTCGCAGTG CGCGGCCGCG TGGTGGTGCG CCGCGCCTAC GCGGACTGGT CCTACTTCGA CGAGGACCGG CGGGCCCTGA CCCGGCACCA GGTCGAGCTC ATCGAGATGC CGCAGCGCAT GGGCGCCTCC CGCAAGAACG CGGCCGACAT CAAGATGGTC GTCGACGCCA TCGAGATGGC GTTCGAGCGC GAGTACATCT CGACCTTCGT CATGTGTACG GGTGACTCGG ACTTCTCGCC GCTCGTGCAC AAGCTGCGCG AGCTCAACAA GCGGGTCATC GGCGTCGGCG TGGAGAAGTC GACCTCCCGG CTGCTGCCCG CCTCCTGCGA CGAGTTCCTC TTCTACGACC GGCTCGAGGG CGTCGACGTG CCCGACGCCG ACGAGACCGC CGCACGCCGC GGCCGCCCGG GACGCGGCGG CAGGGCCGCG CCCGCACCCC AGAAGCGCTC GACGCGCGCC GCCGAGGCCG TCGCCGAGGT GCTTGCGGGG ACGAGCACAG GCGGCGCCGA GCCGGCCGAG AACCCGGCCG AGCCGGCGCC GAAGGGACGC ACGCGTCGCA AGCCGGCGGC ATCGAAGGCC GGCGCCGAGC CCACGGGTGC TGCGGCCGAG CAGGTCACCG CCGAGCCCGC CGCCGAGCCC GCGCCCACCT CCGCGTCACC CGCGGAGCCC GCACCGACGA CCAACGGCGG ACGCCGTCGT GCCGGCAAGG CGGCCACCAC CAAGGAGGCG GCACCCTCGG TCGAGGCACC GTCGTCGGAC GTGGCATCGA ACGACGTGCC GACGACGTCG GACGCGAGTG CCGAGGAGCA CGAGACCACC GAGGAGCGCG AGGCCCCGAG CATGGAGGTC CAGGTGGTGC AGACCCTCGC CAACCTGGCC TCCTCCACCA GCGGCTCGGT GACCGCCTCC ATGCTCAAGC GGACGCTGCT GCGCAAGGAC CCCACGTTCG CGGAGACCGA CTACGGGTTC CGCACCTTCA CCGAGTTCCT GGAGTTCCTC GCGGAGCGGG AGTTCGTCGA GCTCGGCCGC GGCCCGGCCG CCGGCGACCC CGAGGTCTCG CTGCCGAAGC AGGGCACGAG CGACGAGACC TTCGCGCTGG TGCGTGACGT CGTCGCTGAG GCCGGGGCCC CCGTCCCACT GTCCGGACTG AAGAACCGGC TGCGCAAGCG CCGCCCCGAC TTCTCCGAGA AGGCGCTCGG GTACCGCGGG TTCCTGCAGT TCTGCCGGGC CGCCGAGGCG GCCGGCGCGG TCGCGCTGAC CTGGGACGAC GACGCGGACG ACTACCTGGT GACGGCCGCC TGA
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Protein sequence | MDNEERLAVF LDYENLALGA REHLGGMQFD FGPIADALAV RGRVVVRRAY ADWSYFDEDR RALTRHQVEL IEMPQRMGAS RKNAADIKMV VDAIEMAFER EYISTFVMCT GDSDFSPLVH KLRELNKRVI GVGVEKSTSR LLPASCDEFL FYDRLEGVDV PDADETAARR GRPGRGGRAA PAPQKRSTRA AEAVAEVLAG TSTGGAEPAE NPAEPAPKGR TRRKPAASKA GAEPTGAAAE QVTAEPAAEP APTSASPAEP APTTNGGRRR AGKAATTKEA APSVEAPSSD VASNDVPTTS DASAEEHETT EEREAPSMEV QVVQTLANLA SSTSGSVTAS MLKRTLLRKD PTFAETDYGF RTFTEFLEFL AEREFVELGR GPAAGDPEVS LPKQGTSDET FALVRDVVAE AGAPVPLSGL KNRLRKRRPD FSEKALGYRG FLQFCRAAEA AGAVALTWDD DADDYLVTAA
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