Gene Xcel_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0049 
Symbol 
ID8647544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp53166 
End bp54608 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content74% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003324648 
Protein GI269954859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.200181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCACGC ACACCCCCGC TCTCCACGCC ACGACCACCG CGACCGCGCC GATCACCCCG 
ACCAGGGCCC AGCTCCAGCG CGTCCGCTGG TCGCTCGTGA CGATGTTCGG CCTGTTCGGC
ATCGTGCAGA CCTCCTGGAT GGGCCGCCTG CCGTCCGTCC GCGAGAGCCT CGACATCACG
GCCGGCCAGC TCGGCGGCGT GCTGGTGATC GGTGCGGTCG GCTCGCTCGT CGGCGTGACG
CTCACGGGCG CGATCATCGT GCGGTTCGGC AGCCGGGCGA CGCTGCGCCT CGGCATGGTG
GGCACCGTCG TCGGCTTCGC GCTCGTCGGG GCCGGCACCG CGCTCGGGTC CGTGCCCCTG
TTCTCGGCCG GCCTCCTGCT CAACGGCCTG GTCGTCGCCG CGACCAACGT GCCGATCAAC
CTGGAAGCCG CGCGGGTCGA GAAGCTGCTG CGCACCTCGA TCCTGCCGCA CGTGCACGCC
TCGTTCTCCG TCGGCGCCCT GCTGGGCAGC GCCGTCGCCG CCGCGACGTC GACGTTCCAG
ATCCACGTCG CCTGGCACAT CGTCGGCGTC GCGCTGCTGG TCACCGTCGG CCGCGCCGTG
CTCATCGCGC CCGGCACCGA GCTCGCGGAC GCCCCGCTGC GCGTGTCGCG CCGCACCCGC
GCCATCGAGA CCGCCGACGA CGCCGAACGC CGTCGGGTGG CGCGCCGCAA CGGGAGCGGC
GGAGTGCTGC GGGCCTGGAC CGAGCGCCGC ACTCTCCTCA TCGGACTCGT GATCCTCGCC
GCGTCGATGT CGGAGGGCGC CGCCGCCAAC TGGCTCAACC TCGGCGTCGT CGACGGGTTC
GCGACTCGCG AGGCCGTCGG CGCCGCGGCC TACGGGACGT TCGTCGTCGC CATGCTCACC
GTCCGGCTGC TGGGTGCCGG CCTCATCGAC CGGTTCGGGC GCGTGACCGT GCTGCGCGCT
TCCGGCGTCT CCGCTCTGGT GGGTCTACTC GCCTTCGGTC TCTCCCCGAA CCTGCCGCTC
GCCTGGGCGG GCATCGCCCT GTGGGGCGTC GGTGCCGCGA TGGCCTGGCC GCTGGGCACG
GCCGCCGCGG CCGACGACCC GACCCGGGCT GCCGCCCGCG TCTCCGTCGT CGGCTCCTTC
GGGTCGATCG CCTCGCTGTC GATGCCGCCC GTGCTCGGCC TCCTCGCCGA CTCCTGGGGC
GTGCGCCAGG CGCTGCTCGT CATCACGGTC GCGATGGTGA TCAGCCTCGC CGCGGCCAAG
GCGGCCCGCC CCGAGACAGC GCGGTCCGAT GTGCCTGCGT CCGAGGCAGC CCGGTCCGAG
GCACCCGCGC CCCGCGACAC CGCGGAGTCA GCCGCCGTCC CGGTCCAGGT GCGAGGCCAG
CGCCTCGACG ATGCGGACGT CGCCGTCCAG CCAGTGCACG TCGAAGAGCC CGTCGGCGTC
TAG
 
Protein sequence
MPTHTPALHA TTTATAPITP TRAQLQRVRW SLVTMFGLFG IVQTSWMGRL PSVRESLDIT 
AGQLGGVLVI GAVGSLVGVT LTGAIIVRFG SRATLRLGMV GTVVGFALVG AGTALGSVPL
FSAGLLLNGL VVAATNVPIN LEAARVEKLL RTSILPHVHA SFSVGALLGS AVAAATSTFQ
IHVAWHIVGV ALLVTVGRAV LIAPGTELAD APLRVSRRTR AIETADDAER RRVARRNGSG
GVLRAWTERR TLLIGLVILA ASMSEGAAAN WLNLGVVDGF ATREAVGAAA YGTFVVAMLT
VRLLGAGLID RFGRVTVLRA SGVSALVGLL AFGLSPNLPL AWAGIALWGV GAAMAWPLGT
AAAADDPTRA AARVSVVGSF GSIASLSMPP VLGLLADSWG VRQALLVITV AMVISLAAAK
AARPETARSD VPASEAARSE APAPRDTAES AAVPVQVRGQ RLDDADVAVQ PVHVEEPVGV