Gene Xcel_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0043 
Symbol 
ID8647538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp46315 
End bp47223 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003324642 
Protein GI269954853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACGG ATCCCCGTCG ACTCTCGTTC CTGCTCGCCG TGCACCGCGC GGGCGGAGTG 
CTCGCCGCCG CCGATCTGCT CGGCGTGACG GCGTCGGCGG TGTCGCAACA GATCGCACGG
CTGGAGGCCG AAGAGGGCTT CGCCGTGCTG GACCGAGGCC CCCGCGGAGT CACCCTCACC
CCTGCGGGGC GAGTGCTGGC CGAGGCCGCG GAGCGCATCG AGAGCGAGCT GGTCGAGGCC
CGCCAAGCCA TCGCGGCGCT CGGGGACGGG GTGTCCGGGC GGGTGGCGAT CGGCGCCTTC
CAGACGGCGA TCCGCGCCGT CGTGGCCCCC GCTCTGGCAC CGCTGGCCGA ACGCTTCCCG
GGCGTCGAGC TCGACGTGCG GGAGCACGAG CCGGCCGACT CCGTGCGCAT GCTGCGGGCG
GGCGACCTCG ACGTCGTCGT GCTCGAGCGT GACGCCGAGA ACGCGAACCC GGCGCCGCGG
GGTTCGCAGG ACGTGCCGCT GGTCGACGAG CCGTGGCGCC TCGTCGTCCC CGCGAGCACC
GCGGCCCCTG AGCGGCTCGA GGACCTGGCC CGCCTGACGT TCGTCGGTTC CGAGGTGGGG
ACGGCGTCGT CCCGTGCGCT GCAGCGGCTG TCGCGCACGC TCGGCACCGA CATCGGCACC
CGGCACGCGA CGTACGACTT CGACACCACG CTGGCTCTCG TCGCCGCAGG TCAGGGCGTC
GCCCTGCTGC CCGCGCTGGC CCTCCAGGAC GTCGCGCTGA TGGACAGCCT GCAGGTGGTG
CGCCTGGCCG GGCTGGGCGA ACGCCGGCTC GTCGCCCGGC ACCGCGTGAC CCGGCACGAG
CCCAGCCCCG CGGTCCGCGC CGTCGTGGAC GTCATGCGCG AGGTCGCCGC ACGGCTCGAC
CTCGCGTGA
 
Protein sequence
MATDPRRLSF LLAVHRAGGV LAAADLLGVT ASAVSQQIAR LEAEEGFAVL DRGPRGVTLT 
PAGRVLAEAA ERIESELVEA RQAIAALGDG VSGRVAIGAF QTAIRAVVAP ALAPLAERFP
GVELDVREHE PADSVRMLRA GDLDVVVLER DAENANPAPR GSQDVPLVDE PWRLVVPAST
AAPERLEDLA RLTFVGSEVG TASSRALQRL SRTLGTDIGT RHATYDFDTT LALVAAGQGV
ALLPALALQD VALMDSLQVV RLAGLGERRL VARHRVTRHE PSPAVRAVVD VMREVAARLD
LA