| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0003 |
|---|
| Symbol | |
|---|
| ID | 8647495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 3297 |
|---|
| End bp | 4190 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| Protein accession | YP_003324602 |
|---|
| Protein GI | 269954813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.990629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGCC ACATCGGCCT GGTCGGGCTC GGCAAGATGG GCAACAACAT GCGTGCCCGG
CTGCGCCAGG GCGGCATCGA GGTCACCGGG TACGACCCCC GGCCCGAGGT GACCGACGTC
CCGACGCTCG CCGCACTGGT CGAGGCGCTG CCTCCCGGCC GGCGGGTCGT CTGGGTGATG
GTCCCCGCCG GCGAGCCGAC GCGCGGTGTG CTCGCTGAGC TGCGGACCGT CCTGACCAGC
GGCGACATCG TCGTCGAAGG TGGTAACTCG CACTACGTCG AGGACCAGGA GCGTGCCGCC
GAGCTCGCCG AGAGTGGTGT CGGGTATGTC GACGTCGGCG TCTCGGGTGG GGTGTGGGGC
CTGGAGAACG GCTACGGCCT GATGGCGGGC GGCAGCGACG ACGACATCGC GGCGCTCATG
CCCGTCTTCG ACGCGCTGCG ACCGGCAGGC CCGCGCGAAG AGGGCTTCGT GCACGCCGGT
CCGGTCGGCG CCGGCCACTT CGCCAAGATG GTCCACAACG GCATCGAGTA CGGCCTCATG
CAGTCGTACG CCGAGGGCTA CGAGCTGCTC GCCGCCAAGG GCCTCATCAC CGACGTGCAC
GGCACGTTCA AGGCGTGGCA GCGCGGCACC GTGGTGCGAT CCTGGTTGCT GGACCTCATG
GTCCGCGCCC TGGAGGACGA CCCGCAGCTC GCGAAGCTGG ACGACTGGGT CGAGGACTCG
GGCGAGGGTC GCTGGACCGT GGACGAGGCC ATCGAGGCGG CCGTCCCGCT GCCCGTCATC
TCCGCCGCGC TGTTCGCACG GTTCGCCTCG CGGCAGGAGG CCTCCCCCGC GATGAAGGCC
GTGGCGGCGC TGCGCCAGCA GTTCGGCGGC CACGCGGTCA AGTCCGCGCC GTAG
|
|---|
| Protein sequence | MVSHIGLVGL GKMGNNMRAR LRQGGIEVTG YDPRPEVTDV PTLAALVEAL PPGRRVVWVM
VPAGEPTRGV LAELRTVLTS GDIVVEGGNS HYVEDQERAA ELAESGVGYV DVGVSGGVWG
LENGYGLMAG GSDDDIAALM PVFDALRPAG PREEGFVHAG PVGAGHFAKM VHNGIEYGLM
QSYAEGYELL AAKGLITDVH GTFKAWQRGT VVRSWLLDLM VRALEDDPQL AKLDDWVEDS
GEGRWTVDEA IEAAVPLPVI SAALFARFAS RQEASPAMKA VAALRQQFGG HAVKSAP
|
|---|
| |