Gene Tter_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTter_2425 
Symbol 
ID8640454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobaculum terrenum ATCC BAA-798 
KingdomBacteria 
Replicon accessionNC_013526 
Strand
Start bp572754 
End bp574739 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content52% 
IMG OID 
ProductCRISPR-associated protein, Csh1 family 
Protein accessionYP_003324142 
Protein GI269839450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.4331e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCGAGA GCATTTACCA GATAGGGGAA GCCGTGCGCA AAGAAGGCCA GGGTACACGC 
GCTTTCTTGG AGTCGCTGGC TGTCGAGGTG CCTCCTGTCA AAAAGGGCTC GGCACACATA
GCTATATTCG ACTTCAATCT AGAATCGGGA AAAGTTAAGG TAGAGCTTAG AGAGGCCGGC
CGAGAAACGC CCCAGAGATA CCTTTGGATA GGTAATGCCT CGGGGATGAA CGACCAGGAC
AGAGTAACCA CGAAGGATCT CAAGTACTTA GTGTCCCAGA TAGTGCCAAA CCTGTTGTTG
GGAGCCAGGT TGTCCGATCA CTGTCCTCTG CGTGAAAAGC TGCAGCAGCT TGTAGACGTC
TTTTACCTCG ACATTGGGGA AGCCTATGAG CTGGGTCTGC CTATGGACAG TGGCTACCGC
CGGTACAGAA GGCTATGGGA CCTAAACAGG ATGGGTAAGG AAGGTCCGGA CCTAGAGGCT
TTGCGAGAGC TTGCTAAGCA AAATGGGGAT GCTAAGGCAT TACCGGAGGT AGTAGCTCAG
GCTGTGATAA AGGCTTTTGG CCTCGATAGT ACTGTTGTGC TATTCACACT CTCAATAGAT
GGTGAGTTAG TGGTTGATGA CCCTGATTAT CAGGCTTACT TAGAAAGGTC CTATATAGAG
GATGCTTTCG AGGATCCTCT TGAGGGTGTA TGTTACCTGA CGGGCAAGAG AGGACAGGTA
ACCACGGATA TGACCAAGTT TAAATTTAAA TATTACATCA CCGATAAGCC TGGATTCGCA
TCTGGTGCTA CCAAGAAGGG GTTTATGTCG AATCTAACTA TAGGCAAAGA AGCCTATGTG
TCGTTGCTTG TAGGTGAAAG GTTTATACAG CGATATCTAG GATTCAGGTT GCAGAGTATA
GGCGCCAACG GGTACGTAAT TCCGGATGTC TTTACAAATG AGCTCTCAAA TAGGTATGCC
CGTAACCTCC TGATATCTAT CCAGGATTTG AAGCGGAAAG TAGATTATGA CCTTGGACTG
CAGGATCGTG TGGACTTAGT CCTAAGCAAT GAGAGAAGTT TTGGAAGCTA CATGGTCAAT
CTTCTCTTTT ATAAGCAGAG CAAGGAAAAC TTCAAGGTGC TTCGCCTCAT ACAAGATGTG
CCCGAGTACA GGCTGCAGGA GATCAGGCGT GCCTTGGACG ATATCTCGGA GCTGTTCCCC
GAGCTGTACG GCTTCCGCTA CGGACTAACC CTGAGCAACC TTGGATGGCT GCTGCCGGTG
CGCAAGAGCG GTACCGACCT GCTGGTCAAA TCCGTGCTCG ATTTCTACTC CTCGATCATA
GAGGGCGGGG TGCTGGAGAG GCGGGAGCTG GTCGAGGCGT TCCTAGAGCT GGTGCGGGTC
TATATGTTCG GCAACCCCAA CTACCAGGTG AGCATCCCCA AGGATGACGA GCGAGATTGG
ACGGTACTGA GATACCTGGC ACAAACGAAC GTACTGCTGG CCTTCCTTAG GAGCATGGGC
CAGTTGAAGG AGGAAGAGAT GGACCAAGGT TATCTACAAG ACCTCATGCT CTTGGACGAG
CAGAGGGAGT ACCTCTCGCG CCTGAGGTAC ACCCCTCAGC AGACAGCGCT CTACCTGTTG
GGCACGATCA TGGCCGACAT AGCCAGAGAG CAGGCGACCA TGGGGGGTGA GAACGGCTCG
GGTGAGAAGG TTATCCTGAA CAAGCTCAAC TACGAGGGTA TGACCCTGCA GCGCGTGCAG
CGCCTGGCGG TCGAGCTGTT CGACAAGATG AGGCAGTACA AAGTGCTCAC CCCCTGGAAC
GAGCAAGCCT TCGCTCAGGC ACAGGGCCTG TTGAGCGAGT ACGCCTCTCG TTGGAATCTC
ACCCCCGCCG AGAACGTATA CTACATCCTC AGCGGGTACA GCCACTCCAC CCTCCAGGCC
ATGAAGCATG CCCGGTCCCG CTCGAGGGAG GGGGCACAAG CCATAACTAC ATTGAATGGG
GAGTAA
 
Protein sequence
MIESIYQIGE AVRKEGQGTR AFLESLAVEV PPVKKGSAHI AIFDFNLESG KVKVELREAG 
RETPQRYLWI GNASGMNDQD RVTTKDLKYL VSQIVPNLLL GARLSDHCPL REKLQQLVDV
FYLDIGEAYE LGLPMDSGYR RYRRLWDLNR MGKEGPDLEA LRELAKQNGD AKALPEVVAQ
AVIKAFGLDS TVVLFTLSID GELVVDDPDY QAYLERSYIE DAFEDPLEGV CYLTGKRGQV
TTDMTKFKFK YYITDKPGFA SGATKKGFMS NLTIGKEAYV SLLVGERFIQ RYLGFRLQSI
GANGYVIPDV FTNELSNRYA RNLLISIQDL KRKVDYDLGL QDRVDLVLSN ERSFGSYMVN
LLFYKQSKEN FKVLRLIQDV PEYRLQEIRR ALDDISELFP ELYGFRYGLT LSNLGWLLPV
RKSGTDLLVK SVLDFYSSII EGGVLERREL VEAFLELVRV YMFGNPNYQV SIPKDDERDW
TVLRYLAQTN VLLAFLRSMG QLKEEEMDQG YLQDLMLLDE QREYLSRLRY TPQQTALYLL
GTIMADIARE QATMGGENGS GEKVILNKLN YEGMTLQRVQ RLAVELFDKM RQYKVLTPWN
EQAFAQAQGL LSEYASRWNL TPAENVYYIL SGYSHSTLQA MKHARSRSRE GAQAITTLNG
E