| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_2041 |
|---|
| Symbol | |
|---|
| ID | 8640070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013526 |
|---|
| Strand | - |
|---|
| Start bp | 170339 |
|---|
| End bp | 171256 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003323767 |
|---|
| Protein GI | 269839075 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00457854 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTA TATCCATGAG AGGCAGACGG GCGAACGCTA GGGCGCGCAG GGACTTCCTC
TGGGGCTTAT TCTTCACCTC GCCAGCCATA ATCGGCCTGC TCTGGTTCAC AGCTTACCCG
CTGCTGGCCT CCTTTTACTA CAGCTTCACT TCGTACTCCC TCTTCGGGGG CGCCAAGTGG
ATAGGGCTGC AGAACTACAG GGACCTTATG TCGGATGATA ACTGGTGGGT CTCGCTGTAC
AACACGGTGT ACATCCTGGT CGGCTCCATA CCCCTGGGTA TCATCACGGC GCTGGTGCTC
GCCCTCCTGC TCAACATGAA GGTCAGGGGG ATGGCCATCT ACCGCACGCT CTTCTACCTG
CCCAGCATAG TGCCGGCGGT GGCCTCCGCG GTGGTATGGG CCTACGTGTT CAACCCGCAG
TACGGCATAC TGAACAACAT ACTCAGGATC TTCGGGATCA ACGGGCCGGG CTGGCTCGCC
AGCCCCACCT GGGCCAAGCC CGCCCTGATC ATCATGAGCG TGTGGGGCGC GGGCAACCTG
ATGATCATCC TGCTGGCAGG GCTCCAGGAC GTGCCCCAGG AGATCTACGA CGCCGCCAAG
GTGGACGGCG CAGGGTGGTG GGCCAGCTTC TGGAACGTCA CGTTGCCTTT CCTCAGCCCT
CACCTCTTCT ACGCGCTGGT CACGGGGCTG ATAGCTGGCT TCCAGTACTT CACCCCAGCG
TACGTGCTCA CCGGGGGCAA CGGCGGCCCC GCCAGGTCCA CGCTGATCGC GGCCCTGTAC
CTGTACCAGA ACGCCTTCCG CTACTTCAAG ATGGGCTACG CCAGCGCCAT GGCCTGGATC
CTGTTCCTGA TCATACTGGT GATAACCCTG CTGACCTTTA GAACCCTCTC CAGGCGCATA
TACTACGGAG GTGCTTAG
|
|---|
| Protein sequence | MAAISMRGRR ANARARRDFL WGLFFTSPAI IGLLWFTAYP LLASFYYSFT SYSLFGGAKW
IGLQNYRDLM SDDNWWVSLY NTVYILVGSI PLGIITALVL ALLLNMKVRG MAIYRTLFYL
PSIVPAVASA VVWAYVFNPQ YGILNNILRI FGINGPGWLA SPTWAKPALI IMSVWGAGNL
MIILLAGLQD VPQEIYDAAK VDGAGWWASF WNVTLPFLSP HLFYALVTGL IAGFQYFTPA
YVLTGGNGGP ARSTLIAALY LYQNAFRYFK MGYASAMAWI LFLIILVITL LTFRTLSRRI
YYGGA
|
|---|
| |