Gene Tter_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTter_1938 
Symbol 
ID8639967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobaculum terrenum ATCC BAA-798 
KingdomBacteria 
Replicon accessionNC_013526 
Strand
Start bp59892 
End bp60662 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_003323666 
Protein GI269838974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.39688e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCCGG ATAACGTGGC ATTGGAGCTG TACACGCTGA GGGAGCAGAC GCGGGAGGAC 
TTCCCGGGTG CGCTCCGCGC CGTGGCGGAG GCGGGCTACA AGGCCGTGGA GTTCGCTGGC
TACGGCAAGC ATACCCCACA GGAACTCAGG TCGCTGCTCG ACGACCTGGG GATAAAAGCG
ATCAGCGCGC ACGTACCCTA CCAGCGCTTC GAGCAGGAGT TTGATAAGGT CATTGAGGAG
CTGCACACCC TCGGCTGCGA GTACGCCGTG GTGCCCTACA CCTCCGAGGA GCTGCGCAAC
AGCCCGGAGG CCGTCAAGAG GCTGGCTGAG ACTTTCAACC GCTGGGGGGA GCGCTGCGCT
ACGGAGGGGT TGAGGTTCGG CTACCACAAC CACGCGTTCG AGTTCGAACC ATTGGGCGAG
GAGACGATGT ACGACCTGCT CGCGGCCCAG ACGGACCCGG CGTTCGTCGA CCTGCAGATA
GACGTCTACT GGGTGATGTA CGCTGGGCTG GACCCGATCG AGCTCATAAG GAGGCATTCC
GGGCGGGTGC CCACCCTGCA CGCCAAGGAG ATGTCCAACA AGCCCGACAG GTCCGACACG
ACCGTGGGCG ATGGCATCAC TCCCTGGCCG CAGCTCATAG CCGCGGCCAA CGCCTCCGGC
ACCCAGTGGC TGATAGTCGA GCAGGAGGAC GATCCCGCCA ACGCCTACCG CGACATCAAG
CGCAGCCTGG AGAACCTGCG CAACCTCATA TCGATGTCCC TGGGATCCTG A
 
Protein sequence
MGPDNVALEL YTLREQTRED FPGALRAVAE AGYKAVEFAG YGKHTPQELR SLLDDLGIKA 
ISAHVPYQRF EQEFDKVIEE LHTLGCEYAV VPYTSEELRN SPEAVKRLAE TFNRWGERCA
TEGLRFGYHN HAFEFEPLGE ETMYDLLAAQ TDPAFVDLQI DVYWVMYAGL DPIELIRRHS
GRVPTLHAKE MSNKPDRSDT TVGDGITPWP QLIAAANASG TQWLIVEQED DPANAYRDIK
RSLENLRNLI SMSLGS