| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_1007 |
|---|
| Symbol | |
|---|
| ID | 8645493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013525 |
|---|
| Strand | + |
|---|
| Start bp | 1075003 |
|---|
| End bp | 1077879 |
|---|
| Gene Length | 2877 bp |
|---|
| Protein Length | 958 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | excinuclease ABC, A subunit |
|---|
| Protein accession | YP_003322745 |
|---|
| Protein GI | 269926122 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCTG ATAAGATCAG TATACGTGGT GCTCGTGAAC ATAACCTCAA GAATATATCC
TTGGATATAC CAAGAGATAA GCTCGTAGTT CTAACTGGGC TTTCTGGCTC GGGGAAAAGT
AGTTTAGCTT TTGATACTAT CTATGCAGAA GGCCAGAGGC GTTATGTAGA GAGTCTCTCT
GCCTATGCTA GGCAGTTCCT AGGGCAGATG GAAAAGCCCG ATGTAGACCT CATAGAGGGT
CTCTCTCCAG CCATATCTAT CGATCAGAAG GGAACAACCC GTAATCCCAG GTCAACCGTG
GGTACCGTCA CAGAAATCTA TGACTATTTG CGTCTGCTGT TTGCTCGTGT TGGACATCCT
CACTGCCCTA ATTGTGGGAG GGAGATAAGT GGTCAGACCG TAGAGGAGAT CACGGACGCT
GTTTTGAGGC TTCCTAATGG TACGAGGTTG ATGATACTAG CCCCAGTTGT GAGGGGCAGA
AAGGGCGAGT ACTCATCGCT ATTTGCCGAC TTGATGAAGA AAGGTTTTGT TAGGGCTAGA
GTGGATGGGC AAATACATAA CCTGGACGAA CCCATTCAAC TTGAGCGTTA TAAATCTCAT
ACCATTGAAG TAGTAGTCGA TCGAATTGTT ATAAGGCATG GAGATGAAGA AGGATCTTCT
GAGAGGCAAA GGCTGGCCGA TTCTATCGAA ACTGCCTTGC GATTGGCCGA AGGCCTAGTA
GTTGTTTCTG TAATAGATGG GGAAGATATG TTGTTCTCTG AGAACAACGC TTGTCCTGTT
TGTGGTATAA GTGTCGGAGT TCTTGAGCCA CGTACATTTA GCTTCAATAG TCCACATGGC
GCATGCCCCG AATGTACTGG CCTTGGGAGC ATGCTAGAGT TTGATCCAGA GCTGATAATC
AAGTCTCCTG ATACATCAAT AATAGATGGA GCCCTCGAAC CCCTAACAAA GATGGGCCAG
AATACCTCTG CTTATTACAT GGACGTAGTT ACTGCCGTAT GTGAGCAGTA TTCCATACCC
ATGGATGTAC CCGTCTCACA ACTGACTGAA GATAAATTGA AGATACTGAT GTACGGTGCA
CCTGACCCGG TTATCGTGCG CCACCATAGA AGACGATTTG AAGTTAAGTT TGATGGTGTG
GTTTCTATAC TGCGTAAGCG CTACAAGGAG ACGGGATCAG ATTATATCAG GCAGGAGCTC
GAAAGATATA TGTCTAATAG GCCCTGCCCA GTGTGCAAAG GTGCAAGGCT GAAGCCCGAA
GCTCTAGCAG TTACAGTTGC TGGTAAGAAC ATAGTACAGA TAACTGCTAT GAGTATCCGG
GAGGCTTTAG CTTTTATCCA GTATCTATCT GGCCATACCG GGGAAACTCC CCTTACAAAG
AGAGAGTCTC TAATAGCTGC ACCAATACTC AAGGAAATTC GTGAGAGGTT GGGCTTTCTA
GTAGATGTTG GGCTTGACTA TCTCACCCTT GATAGGTCTG CAAACACCTT GGCTGGAGGA
GAGGCTCAGC GTATCAGGTT AGCTACCCAA ATAGGTAGCA GCCTTATGGG AGTTATCTAT
ATCCTTGATG AGCCCAGCAT AGGTTTGCAC CAGAGAGATA ACACTAGACT GATAAACACA
CTGATCAAGC TTCGAGACCT GGGAAACACT GTATTGGTGG TTGAGCATGA CGAAGATACC
ATGCGCGCGG CTGACTGGAT AGTCGATTTG GGTCCAGGGG CTGGCGAACA TGGAGGAGAG
GTCATTGCTC AAGGTACAGT TGAGGATATT GAGAGATCTG AAAAGTCTAT AACGGGGGCT
TATTTGTCTG GCAGGAAATC TATTAGAGTA CCTTCTAGAA GAAGAGAAGG TAATGGTAAA
TTCCTGCGCA TAGTGGGAGC ACGCGAGAAC AATCTGAAGA ATATAGATGT CGAGATACCT
TTAGGAAAGT TCATATGTGT AACTGGTGTG TCAGGATCAG GCAAGAGCAC CCTGGTCAAC
GATATCCTTT ACAGGCGTCT GGCTCAGGAG TTCTACGGCT CGAAGGACAA GCCCGGAGAT
CATGACAGGA TAGAAGGAAT TCATTACCTG GATAAGGTGA TCGACATAGA TCAATCTCCT
ATTGGGAGGA CACCTAGATC TAATCCGGCC ACATATACGG GAGTGTTTAC TTATATTCGT
GAAGTGTTCT CAAAGGTCCC TGAGGCTAGG GCTAGGGGTT ATCAGCCTGG GCGTTTCAGC
TTCAACGTAA AAGGAGGTCG GTGCGAGGCC TGTAAAGGTG AGGGTATCAT CCAGATAGAG
ATGCAATTCC TACCTGATGT CTACGTGCCT TGCGAAGTGT GTCATGGCAA GCGGTACAAT
CGCGAGGCAC TTGAGATCAA GTACAAGGGT TATTCCATAG CCGATGTTCT TGAGATGACG
GCTGAGCATG CGATGGAGTT CTTCGAAAAT ATACCAGCGA TCAGGAACAA ATTGGAGACT
TTGTGTGCGG TTGGCCTCGG ATACATCAAA CTGGGTCAGC CAGCCACAAC TCTGTCTGGG
GGAGAAGCAC AGAGAGTGAA GCTAGCCACA GAGCTCTCTA AGAGAGCCAC AGGTAAAACG
CTCTACATTC TAGATGAACC CACAACGGGA TTGCACTTTG CCGATGTAGA TAAGCTCTTA
AATGTACTAC AAAGGCTGAC TGATGCTGGT AATACAGTTC TGGTTATAGA ACATAACCTT
GATGTGATTA AGTGTGCAGA CTGGATAATA GATCTTGGTC CTGAAGGTGG AGAAGGCGGA
GGGCAAGTGA TTGCTCAGGG TACTCCGGAA GATGTCGCTA TGTGCGAACA TTCCTATACC
GGCCAGTATC TCAGACCTAT GCTTGAGAGA GACTTGGAAT TAAGAGCTGT CAGCTAA
|
|---|
| Protein sequence | MPPDKISIRG AREHNLKNIS LDIPRDKLVV LTGLSGSGKS SLAFDTIYAE GQRRYVESLS
AYARQFLGQM EKPDVDLIEG LSPAISIDQK GTTRNPRSTV GTVTEIYDYL RLLFARVGHP
HCPNCGREIS GQTVEEITDA VLRLPNGTRL MILAPVVRGR KGEYSSLFAD LMKKGFVRAR
VDGQIHNLDE PIQLERYKSH TIEVVVDRIV IRHGDEEGSS ERQRLADSIE TALRLAEGLV
VVSVIDGEDM LFSENNACPV CGISVGVLEP RTFSFNSPHG ACPECTGLGS MLEFDPELII
KSPDTSIIDG ALEPLTKMGQ NTSAYYMDVV TAVCEQYSIP MDVPVSQLTE DKLKILMYGA
PDPVIVRHHR RRFEVKFDGV VSILRKRYKE TGSDYIRQEL ERYMSNRPCP VCKGARLKPE
ALAVTVAGKN IVQITAMSIR EALAFIQYLS GHTGETPLTK RESLIAAPIL KEIRERLGFL
VDVGLDYLTL DRSANTLAGG EAQRIRLATQ IGSSLMGVIY ILDEPSIGLH QRDNTRLINT
LIKLRDLGNT VLVVEHDEDT MRAADWIVDL GPGAGEHGGE VIAQGTVEDI ERSEKSITGA
YLSGRKSIRV PSRRREGNGK FLRIVGAREN NLKNIDVEIP LGKFICVTGV SGSGKSTLVN
DILYRRLAQE FYGSKDKPGD HDRIEGIHYL DKVIDIDQSP IGRTPRSNPA TYTGVFTYIR
EVFSKVPEAR ARGYQPGRFS FNVKGGRCEA CKGEGIIQIE MQFLPDVYVP CEVCHGKRYN
REALEIKYKG YSIADVLEMT AEHAMEFFEN IPAIRNKLET LCAVGLGYIK LGQPATTLSG
GEAQRVKLAT ELSKRATGKT LYILDEPTTG LHFADVDKLL NVLQRLTDAG NTVLVIEHNL
DVIKCADWII DLGPEGGEGG GQVIAQGTPE DVAMCEHSYT GQYLRPMLER DLELRAVS
|
|---|
| |