Gene Tter_0485 details

Gene Information

• Locus tag: Tter_0485
• ID: 8644949
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013525
• Strand: -
• Start bp: 540884
• End bp: 543019
• Gene Length: 2136 bp
• Protein Length: 711 aa
• Translation table: 11
• GC content: 53%
• Product: DNA topoisomerase I
• Protein accession: YP_003322228
• Protein GI: 269925605

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAACA AACTAGTAAT AGTTGAGTCG CCTACCAAGG CCAAGACGAT CAGCAGATAT 
TTGGGCAGAG GCTACTCGAT CAAAGCCTCT ATGGGGCACG TCCGAGACCT CCCCAAGAGC 
AAGCTGGGAG TAGATACCGA GCACGACTTC CAGCCACAGT ACCTCATACC CAGAGATAAA 
TCAAAGACAG TTAAAGAGCT CAAGGAGAGC GTGGCCTCGG CACGAGAGGT GTATCTAGCA 
ACTGACCCCG ATCGTGAGGG GGAAGCTATC GCCTGGCATC TGATACAGGC CACTGGTATG 
GACACTAGCA AAGCCCGAAG AGTCGTATTT CACGAGATAA CACCAGATGC AGTACGCAAC 
GCCATGGCTA ATCCTCGCGA GATCGACATG AGGCTCGTAG ATGCTCAGCA AGCTCGAAGA 
GTCCTTGACC GACTTGTCGG CTACAATATC AGCCCTCTTC TATGGAAGAA GGTCAAGAGA 
GGACTATCGG CAGGAAGAGT ACAATCAGTG GCCCTGAGAC TGGTAGTTGA TCGTGAGCGA 
GAGATCCAGT CCTTTGTGCC AGTAGAATAC TGGACCATCT CTGCCGACCT TGCCAAGCAA 
CCAGCGAAGG GCAGGAAGCC GAGTCGGAAG GATCAGTTCA GGGCCTTACT GGTAAGGATC 
AACGACGAGA AAGTAGAGAT CTCCAACGAG GAGCAGGCCA GGGCGATAAT CGAGGCTCTG 
GAAGGTGCCA CGTACAAGGT ACTTGAAGTC AAGCAGCGGG AGATCCAAAG AAAGCCCGCG 
CCTCCCTTTA TCACCAGCAC CATGCAACAG GAGGCATCCA GGAAACTTAA TTTCAACGCC 
CGCCGAACCA TGAGCGTGGC CCAGAGTCTA TACGAAGGAG TATCACTGGG CGATGAGGGT 
GATGTCGGTC TAATAACTTA TATGAGGACC GACAGTACCA ACGTGGCTAC TGTGGCTCAG 
GAAGAAGCCA GGCAGGTCAT TGCCCAGTTG TTTGGGGACA AGTATCTCCC TGAAAAGCCG 
CCGGTATACA CCAAAAAGGC CAAGAACGCT CAAGAAGCAC ACGAGGCCAT AAGGCCCACC 
AGCGTCAAGA GGCATCCTGA TGCCATAAAG CAGTACCTTA CATCTGACCA GTACAAGCTC 
TACAAGCTTA TATGGCAGAG GTTTATAGCC AGCCAGATGG CCAACGCAAT AATAGACGGC 
ACCACCGTCG ATATAGCAGC AGAACCCAGG AGCGGTGGAG CCCCCTATAT CTTCAGAGCT 
ACAGGCTCGG TAATAAAGTT CGATGGCTTT TTGGTAGTGT ACCAGGAAGG CAAGGACGAC 
GATCAGGAAG AGGAGCTGGG CAGTAAGGCT CTGCCTCCTA TGACAGAGGG AGAGGTGCTG 
AACCTGATAC AACTGTTGCC TGAGCAGCAC TTCACACAAC CTCCCCCGAG ATATACCGAG 
GCATCGCTGG TGAAGGCTCT GGAGGAACAG GGTATAGGGA GACCTAGCAC CTATGCCATA 
ATCCTCTCCA CGCTGCAGGA AAGATACTAC GTGGTCAAAG ACGGCAAAGC ATTAGTACCA 
ACGGAGCTGG GTATGCTCGT CAACGACCTG CTGGTCGAGC ACTTCCCGGA CATAGTCGAC 
GTAAACTTTA CATCTCAGAT GGAAGAGGAG CTAGATGATA TAGCCTCCGG AGAGCGCGCA 
TGGGTGCCGG TGATTAAGGA ATTTTATGGG CCGTTCGAGC GCAAGGTGCG CATAGCGGAA 
GAAGAGATGC AGAAGGTTGA CATTCAGGAC GAACCGGCAG GCGAAAACTG TCCCAACTGC 
GGCAGACCCA TGGTCTTCAA GATGGGCAGA TATGGCAAGT TTATAGCCTG CTCTGGTTTC 
CCTGAGTGCC GTACGACCAA GGCCATAGTC AACCGCACAG GGGTGCAGTG CCCAGCCTGT 
CGGCAGGGAG AACTGGTTGA GAGGCGTTCC CGCAAAGGCA GGAGATCTAT CTTCTATGCA 
TGCGACAGGT ATCCAGATTG TGAGTTCACG ATAAGCGCCA AACCCCTTCC ACAGCCCTGC 
CCGGCCTGCG GTGGCCTCCA GGTCGAAGAT GGCAAGAACG GGCAAAAGTG CATCAGGTGC 
GACGGGCAGG GAAATATACT GCAGAAAAGC GCTTAG 

 

Protein sequence

MANKLVIVES PTKAKTISRY LGRGYSIKAS MGHVRDLPKS KLGVDTEHDF QPQYLIPRDK 
SKTVKELKES VASAREVYLA TDPDREGEAI AWHLIQATGM DTSKARRVVF HEITPDAVRN 
AMANPREIDM RLVDAQQARR VLDRLVGYNI SPLLWKKVKR GLSAGRVQSV ALRLVVDRER 
EIQSFVPVEY WTISADLAKQ PAKGRKPSRK DQFRALLVRI NDEKVEISNE EQARAIIEAL 
EGATYKVLEV KQREIQRKPA PPFITSTMQQ EASRKLNFNA RRTMSVAQSL YEGVSLGDEG 
DVGLITYMRT DSTNVATVAQ EEARQVIAQL FGDKYLPEKP PVYTKKAKNA QEAHEAIRPT 
SVKRHPDAIK QYLTSDQYKL YKLIWQRFIA SQMANAIIDG TTVDIAAEPR SGGAPYIFRA 
TGSVIKFDGF LVVYQEGKDD DQEEELGSKA LPPMTEGEVL NLIQLLPEQH FTQPPPRYTE 
ASLVKALEEQ GIGRPSTYAI ILSTLQERYY VVKDGKALVP TELGMLVNDL LVEHFPDIVD 
VNFTSQMEEE LDDIASGERA WVPVIKEFYG PFERKVRIAE EEMQKVDIQD EPAGENCPNC 
GRPMVFKMGR YGKFIACSGF PECRTTKAIV NRTGVQCPAC RQGELVERRS RKGRRSIFYA 
CDRYPDCEFT ISAKPLPQPC PACGGLQVED GKNGQKCIRC DGQGNILQKS A