Gene Tter_0027 details

Gene Information

• Locus tag: Tter_0027
• ID: 8644483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013525
• Strand: -
• Start bp: 27108
• End bp: 29180
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 48%
• Product: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
• Protein accession: YP_003321772
• Protein GI: 269925149

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGAAAA GTCAGGAAGT TACTAGCAAC AGGTATTGCG TAGACCCTTA CTCCTACAAG 
AGGCGGTGTA CTCATGAGGT AATGGTTGGT AATGTGGGAG TTGGGGGAAA TAATCCAATA 
AGAGTTCAGT CGATGACCAC AACCAGGACA AAGGATGTGG AATCGACTGT TAATCAGATC 
GTGTCCTTGG CGAGAGTGGG CTGCGAGATA GTGAGAGTTA CTACTCCCAC GCCTGCTGAT 
GCCAGGGCCA TAAAGGATAT CAAGAAGGAG CTTCAGTCCA AGAATATACA CATTCCTATA 
GTGGCTGATG TTCATTTCAG TCCTCATGCA GCGATGGAGG CTGCGCTATG GGCGGACAAA 
GTAAGGATCA ACCCGGGTAA TTTTGCGGAC ACTAAGCTCT TTCACATAAA AGAGTACACC 
GATGAGGAGT ATGCTAAGCA TCTGGAGAAG ATAGCTGAGA AGCTATATCC TCTGGTGATG 
CGTTGTAAGG AGAGGGGAAT ATCGATGCGC ATTGGCACTA ATCATGGTTC CCTCTCCGAC 
AGGATAATGT CCAGGTATGG TGATACCCCG CTGGGCATGG TGGAGTCCGC CCTCGAGTTT 
GTGCGTATGT GTGAAGAGTG GGGATACAAG GACATAATAC TTTCTATGAA AGCCTCTAAT 
CCAAAGGTAA TGATAGCTGC CTATAGGCTT CTCGCTGCCA GGATGCTCGA GTACGGCATG 
ACTTATCCCT TCCACTTGGG TGTCACAGAG GCTGGCAATG GTGAAGATGG ACGCATCAAG 
TCAGCTATTG GTATAGGTAC TTTGCTTGAG GATGGGATAG GTGACACTGT AAGGGTTTCC 
CTTACTGAAG ACCCTGAAAA CGAGATCCCA TTCGCCTACG AACTAGTCAA GCGATATGCT 
TATGGTATAG TCCCAGACAG TGATGAAGCC ACATCTATAG ATCCTCTGCC GGATCTTAGG 
TCACCTTTTG ACTATTCTCC AAGACCGACC AGGAAAATAT TCCTGGGAGA GCACGTGCTT 
GGAGCTAATA ATCCTCCTCT AGTGCTCTAC AAGCAGTCGT CTCCTCTATC AATTAACGGG 
GTAGTCAGCA TAAATAGGCC CGTTGGTCGC GATAGCCTGA GGGCAGATGC ATTGTCTCTG 
GAGGTGGTAT CTGAGAAGGA CAGGGACGTT TTTCAGACGT CAGCTAGTGG TTTACAGTTC 
GCATCCAACA AGCCAGCCTT GATCGCTACC CTTCGATTCC CTGTGGATGT GAGAGATATT 
GAAGCCGCGG CCTACATGTG TTCTATAGAA CGGGGACAAG AGGATAGGTT GTCTACGGTT 
GCACGGCTTG CCGTTGAGCA CAAGCGTCCG CTTGTTCTAG AACTTATCGC TAATATTGCC 
CATGATCAAG CGCGCGATCT TGAGGGTAAG CATGATTATT CTGTGGTTGA TGAGCTGATA 
AGTTATGCAC TGAAGGTCGA GCAGTTTGGG GTAAATGATC TTATCCTTGC CCTGAGAATA 
CCTGATAGAT CTTACCGTAT CAGGGCCTAT AGGCTACTAG ATTCGAGGCT AAGGGAGCTA 
GGGAAAGATT GGAACCTCCT TTTGACGGTC ACCGAAGATG ACCTGATAGA TGCCTCGATT 
GGCCTCGGTT CTCTATTGTG CGATGGTATA GGCTCTATGG TTTCTATAGA AGGCAATAAA 
CCCTATGAGG AAAAGATAAG CTTGGTGTTC AATATCCTCC AGGCTTCTGG TGCTAGGATC 
AGCAAGGCGG AGTTTATAGC CTGCCCTAGC TGTGGTAGAA CGCTCTTTGA TTTACAGACG 
ACCACCGAAA AGATCAAGAG TAAGACTGGT CATTTGAAAG GCGTCAAAAT AGCTGTGATG 
GGTTGTATCG TGAATGGCCT TGGGGAGCTG GCAGATGCTG ACTTCGGCTA TATGGGAAGC 
GGCGAGGGTA AAGTAAATCT ATTTGTGGGC AAGACCTGCG TTGAGAAGAA TGTGCCGGAA 
GAAATAGCTG CAGACAAACT GGTGGATTTG ATCAAGGCTC ATGGCAGGTG GATCGATCCT 
CCAGACAATA ACTCCTCTAT GCATGACTCC TAG 

 

Protein sequence

MVKSQEVTSN RYCVDPYSYK RRCTHEVMVG NVGVGGNNPI RVQSMTTTRT KDVESTVNQI 
VSLARVGCEI VRVTTPTPAD ARAIKDIKKE LQSKNIHIPI VADVHFSPHA AMEAALWADK 
VRINPGNFAD TKLFHIKEYT DEEYAKHLEK IAEKLYPLVM RCKERGISMR IGTNHGSLSD 
RIMSRYGDTP LGMVESALEF VRMCEEWGYK DIILSMKASN PKVMIAAYRL LAARMLEYGM 
TYPFHLGVTE AGNGEDGRIK SAIGIGTLLE DGIGDTVRVS LTEDPENEIP FAYELVKRYA 
YGIVPDSDEA TSIDPLPDLR SPFDYSPRPT RKIFLGEHVL GANNPPLVLY KQSSPLSING 
VVSINRPVGR DSLRADALSL EVVSEKDRDV FQTSASGLQF ASNKPALIAT LRFPVDVRDI 
EAAAYMCSIE RGQEDRLSTV ARLAVEHKRP LVLELIANIA HDQARDLEGK HDYSVVDELI 
SYALKVEQFG VNDLILALRI PDRSYRIRAY RLLDSRLREL GKDWNLLLTV TEDDLIDASI 
GLGSLLCDGI GSMVSIEGNK PYEEKISLVF NILQASGARI SKAEFIACPS CGRTLFDLQT 
TTEKIKSKTG HLKGVKIAVM GCIVNGLGEL ADADFGYMGS GEGKVNLFVG KTCVEKNVPE 
EIAADKLVDL IKAHGRWIDP PDNNSSMHDS