| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1714 |
|---|
| Symbol | |
|---|
| ID | 8631587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | + |
|---|
| Start bp | 1796105 |
|---|
| End bp | 1796875 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003318210 |
|---|
| Protein GI | 269793306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0085463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCGG AGGAGAGACG ATCGGCGATC CTGGCGCTGG TGGGCCAGGG GATATCCTCG
GTGCCCCAGA TAGCCCATCG GGTTGGGGCC TCGGAGGCCA CGGTGAGGCG GGATCTGGCG
CACCTGGAGG AACGGGGGCT TCTACGCCGG ACACATGGGG GGGCGTTGCC GGTGGGCTAC
GGGGCGGAGC CGTCCTTCAA GGAGAAGCGG GTCAGGAACC TGGAGGAGAA GCGGGCCATA
GGGACCGCCT CCGCCGGGCT GGTGGAGGAC GGGGAGCGGG TCCTGATCGA CGCGGGGACC
ACCACGATGG AGCTGGCCCG GGGCCTATTG GGGCGTCGGA TAACGGTGGC CACCAACTCG
CTGGACGTGG CCCAGGTGTT CATGAACGAC CCGGTGGTGG AGCTCTGGGT CATAGGGGGT
GTGATGAGGA AGTCCCCCCG GTCCCTGGTG GGGTTCCTGG CGGACATGGG GCTGGAGGCC
CTTCGGTTCG ACGTGGCCTT CATAGGCGCC AACGGGGTGA GCGCCCCCTT CGGGGCCAGC
ACCCCGAACC CGGAGGAGGC CAGGACCAAG GCCCTCATGA TCCGGTCCGC CGCCCGGGGA
TACCTGCTGG TGGACCACTC CAAGCTAGGG CGGGACAGCG CCTGCCGGAT GTTTCCCCTG
GAGGAGCTGA CCGGCCTGGT GACCGACTGG GGGGCGGATG ATGAGGAGGT GAGGGCCCTC
TCCCGGGTGG TGAAGGTGCT GAGGGCCGGG GAGGACGGAA GATGGCTATA G
|
|---|
| Protein sequence | MLPEERRSAI LALVGQGISS VPQIAHRVGA SEATVRRDLA HLEERGLLRR THGGALPVGY
GAEPSFKEKR VRNLEEKRAI GTASAGLVED GERVLIDAGT TTMELARGLL GRRITVATNS
LDVAQVFMND PVVELWVIGG VMRKSPRSLV GFLADMGLEA LRFDVAFIGA NGVSAPFGAS
TPNPEEARTK ALMIRSAARG YLLVDHSKLG RDSACRMFPL EELTGLVTDW GADDEEVRAL
SRVVKVLRAG EDGRWL
|
|---|
| |