| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1713 |
|---|
| Symbol | |
|---|
| ID | 8631586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | + |
|---|
| Start bp | 1794681 |
|---|
| End bp | 1795835 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003318209 |
|---|
| Protein GI | 269793305 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00398016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTGG ATCTGATGGG AAGGCTGAGG GTCCTTGGGG ACTCTGCCCG GTTCGACGCC
TCCTGCGCCC CCTTCAGGGA GAGGGCCCTT GGTGTCCTGC CCGGGGTGGT CTGGGCCAAC
CGTTGCCGGG TCCTCAAGGT GCTCATGAGC AACCGGTGCG GCTACGACTG TGCCTACTGT
GTGAACCGGG CCAGCTCCCC GGTGGATCGG GCCCAGATGG AGCCCCGGGA GCTGGCGGAC
CTGTTCGCCT CCCTGTGGCG CAGGGGGTTG GTGCAGGGGA TCTTCCTCAG CTCCGCGGTG
GTGGGCTCCC CGGACGGGAC CATGGAGAGG ATGATCCGGG CGCTTGAGAT CATCCGGCGG
GAGCATCGAT TCGGGGGCTA CGTGCACGCC AAGGTGATCC CCGGGTCGTC GTTTGGCCTG
ATCCGGCAGA TGTGCCTCCT GGCGGACCGG GTGAGCGTGA ACCTGGAGGT CCCCTCCGAG
GAGGGGTTGA GGGCCCTGGC CCCCCAGAAG GAGGGCAGCG CCATCCTGGC CCCCATGGGG
AGGGTGGCGT CCCTCCTGGA GGAGATGGGG AGCTCGGGAC ATCTGAAGGG GGGGCACACC
ACCCAGATGA TCCTGGGGGC CACGGAGGAC CCGGACCGGG AGGTCCTCAA GGTCTCCAGC
GCCCTATACC GCCGATTCAG GCTGAGGCGG GTCTACTACT CGTCCTACGT CCCCGTGTCG
GAGGACCCAA GGCTTCCCCG GAGGGACCCG GACAGGCTAC GGGAGGTCCG GATCTACCAG
GCGGACTTCC TGATGAGGCA GTACGGGATG AGCTACCGGG AGATCCTGGG GGACCGGCAA
CAGCTGGACC GCCGGCTGGA CCCCAAGGCC TCCTGGGCGC TCAGGAACGT CCACCGGTTC
CCGGTGGACC TGAACTCCGC GGAGGCGGAG GAGATCCTGA TGGTGCCCGG CATAGGTCCC
AAGGGGGTCA GGGCCATCCT GGAGGCCCGC CGGAGGGGCA GGCTTCGGAT CGAGGATCTT
GGGTCCCTGG GGCTCCGGGT GGGCAGGATA AGGCACTTCG TCACCTGCGA CGGCCACCGG
CCCCGGCTTC TCGAGTCATC CCATCTGGAG GAGCTCCTTT CCGCTCCCCC ACGGCAGGCG
AGCCTCTTCC AATAA
|
|---|
| Protein sequence | MAVDLMGRLR VLGDSARFDA SCAPFRERAL GVLPGVVWAN RCRVLKVLMS NRCGYDCAYC
VNRASSPVDR AQMEPRELAD LFASLWRRGL VQGIFLSSAV VGSPDGTMER MIRALEIIRR
EHRFGGYVHA KVIPGSSFGL IRQMCLLADR VSVNLEVPSE EGLRALAPQK EGSAILAPMG
RVASLLEEMG SSGHLKGGHT TQMILGATED PDREVLKVSS ALYRRFRLRR VYYSSYVPVS
EDPRLPRRDP DRLREVRIYQ ADFLMRQYGM SYREILGDRQ QLDRRLDPKA SWALRNVHRF
PVDLNSAEAE EILMVPGIGP KGVRAILEAR RRGRLRIEDL GSLGLRVGRI RHFVTCDGHR
PRLLESSHLE ELLSAPPRQA SLFQ
|
|---|
| |