| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1639 |
|---|
| Symbol | |
|---|
| ID | 8631509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 1708187 |
|---|
| End bp | 1709227 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_003318135 |
|---|
| Protein GI | 269793231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000169199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACCG TGTTGGAGGT TGATCTGGGG CTAGGAGGAC GGGGGCTTGC GGACCTCATG
GACCGTTTGG CGGAAATGGG GCGAGAGGCC CGGCTGGTGA GCCTTGAGGG TGTCCGTTAC
GTGGTGGTCC ATGGGAGGGT CTCCGCCTCG GACCTATCGG GCCTGCCGGT CCGGTGGGTT
CGTTCCACCG GGGCGTCGTA CCCTTTGGTT AGCCGGGAGG CGGGGGTTTG CGGTCCGGTC
CGGGTGGGCT CCGTTGAGGT GGGGGGTGGG GATCTGGTGG TAATGGCGGG GCCCTGTTCG
GTGGAGGGCC GGGACCAGAT TGTGTGCACC GCCCTTGGGG TGAAGGAAGC GGGGGCATCG
ATCCTTCGGG GCGGGGCCTT CAAACCCAGG ACGAACCCGT ACAGCTTCCA GGGGCTTGGG
GGGATTGGGG TTGGGCTTCT GAAGGAGGCC TCCCGGGTCT CCGGGCTGCC GGTGGTCACG
GAGGTCATGT CCCCCGAGGA CGTGGAGTGG ATGTCCGAGG AGGCGGACCT GTTGCAGGTG
GGGGCCCGCA ACATGCAGAA CTTCCCCCTC TTGAGGGAGG TGGGCAGGTC CCACCGGCCG
GTGCTCCTGA AGCGGGGGAT GATGGCCACC GTGGACGAGT GGCTTCAGGC GGCGGAGTAC
GTGGTCTCCT CCGGCAACCC GGGGGTGATC CTGTGCGAGC GGGGCATAAG GAGCTTCGAC
CGGGCCACCC GGAACCTGCT GGACCTCTCG GCGGTGCCGC TGGTGAAGCG GCTGTCCGGG
TTGCCGGTGG TGGTGGACCC CAGCCACGGG ACCGGCAGGC GGGACATGGT GATCCCCATG
AGCCTGGCGG CGGTGGCCGC CGGGGCGGAC GGGCTGATCG TGGAGGTGCA TCCCTCCCCC
AAGGACGCCC TCTGCGACGG GGACCAGTCG TTGGATCTGG ACGAGTTCAG GGACCTTATG
GGGGCCCTGG GGGCCCTGAC GGGGGCCCTC AACGGCAGAT GGGAGGTGCC CTCGTGGGAG
CGGGTCGCCA TGTTGGCATA G
|
|---|
| Protein sequence | MMTVLEVDLG LGGRGLADLM DRLAEMGREA RLVSLEGVRY VVVHGRVSAS DLSGLPVRWV
RSTGASYPLV SREAGVCGPV RVGSVEVGGG DLVVMAGPCS VEGRDQIVCT ALGVKEAGAS
ILRGGAFKPR TNPYSFQGLG GIGVGLLKEA SRVSGLPVVT EVMSPEDVEW MSEEADLLQV
GARNMQNFPL LREVGRSHRP VLLKRGMMAT VDEWLQAAEY VVSSGNPGVI LCERGIRSFD
RATRNLLDLS AVPLVKRLSG LPVVVDPSHG TGRRDMVIPM SLAAVAAGAD GLIVEVHPSP
KDALCDGDQS LDLDEFRDLM GALGALTGAL NGRWEVPSWE RVAMLA
|
|---|
| |