Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_1346 |
Symbol | |
ID | 8631198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 1395170 |
End bp | 1397296 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | DNA topoisomerase I |
Protein accession | YP_003317859 |
Protein GI | 269792955 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000122971 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCATGG CGGCCCGATC GAAGTCCGCC CCGGAGGCCA AGGCCCCCAA GACGGCCAAG GGGAGCAAGG CCACCGGCAA GGGTAGCAGG GCCTCCGGGA CCCGGTCCCC CAAGGTGGGT CCCGTGGAGA CCCTGGTGGT GGTGGAGTCC CCCACCAAGG CCAAGAGCTT GAGCAAGATG CTGGGGCCCG GCTACGCGGT GGAGGCCAGC CTGGGGCACG TGATGGACCT TCCCAAGGTG AGGCTGGGGG TGGACGTGGA GAACGGTTTC GAGCCCGAGT ACATCCAGGT CAGGGGCAAG GGGCCGGTGA TAAAGCGCCT CAAGGAGCTG GCCAGGGGGG CCAGCCGGGT TCTCCTGGCC TCGGACCCGG ACCGGGAGGG GGAGGCCATA GCCTGGCATC TGGCCACCCT CCTGGGGGTA CCCCTGGACT CCCCCTGCAG GGTCCGGATC CACGAGATAA CCCCCTCGGG GATCTCCGCC GCCCTTCAGG AGGTGGAGGG CATAGACATG AACAAGGTCT ACGCCCAGCA GGCCCGGCGG GTCCTGGACA GGCTGGTGGG CTACCGGCTG AGCCCCCTCC TCTGGGCCAA GGTCCAGCGG GGGCTCAGCG CCGGGAGGGT CCAGTCGGTG GCGTTGCGGC TGGTGTGCGA GCGGGAGGAC GAGATAGACT CCTTCGTGCC CGAGGAGTAC TGGCTGGTGG AGGTCCAAGC GGAGGCGGAG GGGGGCAGGT CCTACCTGCT CAAGCTGGAC AAGGAGGCGG GTAAGCCCGT AAGGCTAAAG GACCAGGCGG ATGCCCGGCG GGTGGAGGCC CTGGTTAGGT CCAGCCCCCT CCAGGTGTCC TCCTTCCGGA GCCGGGATGG CCTGAGGCGT CCCATGCCCC CCTTCAAGAC CAGCACCCTC CAGCAGGAGG CCTCCCGGCG CCTGGGCTAC GGCCCCAGGA GGACCATGCG GATCGCCCAG TCCCTCTTCG AGGGGGTGGA GATCCCCGGT CGGGGCCCGG TGGGGCTCAT AACCTACATG AGGACCGACA GCCTCCGGAT CTCCGACGAG GCCATATCCG CCATGAGGGG CCACATAGCC TCCCGGTTCG GCCCCATGTA CCTGCCCGAG AGGCCCAACC ACTTTGCCCA GAAGGGCAGG AGCCAGGACG CCCACGAGGC CATCCGCCCC ACGGACGTGA CCCTGGAGCC CGACGCCATA AGGGAGTACC TGTCCAGCGA GCAGTACCGG CTCTACGACC TGATCTGGCG CCGAGCCCTG GCGAGCCAGA TGGCGGACGC CCGGGTGAGG ACCAACACCC TGGAGGCCCG ATGCGGGGAG CTCACCTTCA AGTGCTCCGG GGTGGAGGTC ACCTTCCAGG GCTGGGGGGC CGTGTGGCCC CTTGGGGTCA AGGACACCGA GGTGCCCGCC GCCTCCGAGG GGGAGGATCT GAGGCCCCTC CAGGTGAGGC TGGAGCAGAA GTTCACCCAG CCGCCGGGGA GGTACACCGA GGCGGGGCTC ATAAAGGCCC TGGAGGAGAA GGGCATAGGG CGCCCCTCCA CCTACGCCAC CATAGTGGAG ACCCTCTCCG ACCGGGGCTA CGTGGTTCGG GACGACGACA AGAAGCTCTC CCCCACCAAG CTGGGGCGGG TGGTGAACGC CTTCCTGGTG ACCCACTTCC CCGACGTGGT CCAGGTGGAC TTCACCGCCA GGATGGAGGA CCAGCTGGAC CGGGTGGAGT CCGGCGAGAT CCAGTGGAGG GAGCCCATAG GGGATTTCTA TGGTCCCTTC GAGTCCAGGC TCCAGGAGGT GGCCGCCAGC GCCCAGCGGA TGACGGTCCC CCCGGAGCTT GCCGGCGAGG ACTGCCCCCA GTGCGGCCGG CCCCTCCTGA TCCGCCGGGG CCGGTACGGG GAGTTCATCG GGTGCAGCGG CTACCCGGAG TGCGACTTCA CCAAACGGAA GGAGACCTCC ACCGGGGTCC CCTGTCCCAA GTGCGGCCAG GGGACCGTGG TGGCCCGGAA GGCTTCCAAG GGAAAGGGTA AGGGCCGGAC CTTCTACGGC TGCTCCAGGT ACCCGGAGTG CGACTACGTG TCTTGGAGCA AGCCCAAGGG GGACGGGACG GTTTCGGAGG TGCGGGATGA GGTTTGA
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Protein sequence | MTMAARSKSA PEAKAPKTAK GSKATGKGSR ASGTRSPKVG PVETLVVVES PTKAKSLSKM LGPGYAVEAS LGHVMDLPKV RLGVDVENGF EPEYIQVRGK GPVIKRLKEL ARGASRVLLA SDPDREGEAI AWHLATLLGV PLDSPCRVRI HEITPSGISA ALQEVEGIDM NKVYAQQARR VLDRLVGYRL SPLLWAKVQR GLSAGRVQSV ALRLVCERED EIDSFVPEEY WLVEVQAEAE GGRSYLLKLD KEAGKPVRLK DQADARRVEA LVRSSPLQVS SFRSRDGLRR PMPPFKTSTL QQEASRRLGY GPRRTMRIAQ SLFEGVEIPG RGPVGLITYM RTDSLRISDE AISAMRGHIA SRFGPMYLPE RPNHFAQKGR SQDAHEAIRP TDVTLEPDAI REYLSSEQYR LYDLIWRRAL ASQMADARVR TNTLEARCGE LTFKCSGVEV TFQGWGAVWP LGVKDTEVPA ASEGEDLRPL QVRLEQKFTQ PPGRYTEAGL IKALEEKGIG RPSTYATIVE TLSDRGYVVR DDDKKLSPTK LGRVVNAFLV THFPDVVQVD FTARMEDQLD RVESGEIQWR EPIGDFYGPF ESRLQEVAAS AQRMTVPPEL AGEDCPQCGR PLLIRRGRYG EFIGCSGYPE CDFTKRKETS TGVPCPKCGQ GTVVARKASK GKGKGRTFYG CSRYPECDYV SWSKPKGDGT VSEVRDEV
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