| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1232 |
|---|
| Symbol | |
|---|
| ID | 8631081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 1282212 |
|---|
| End bp | 1283240 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | metalloendopeptidase, glycoprotease family |
|---|
| Protein accession | YP_003317746 |
|---|
| Protein GI | 269792842 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGG ACTCCCCCTT TCTGGTCCTG GGGATCGAGA GCAGCTGTGA TGACACCGCG
GTGGCGGTAC TGGAGGAGCC CAGGAGGATC CGGGCCTCGC TGGTGATGAG CCAGGTGGAG
GACCACGCCC CTCACGGGGG GGTGGTCCCC GAGCTGGCCA GCCGCCGCCA CCAGGAGGCC
ATCATGGGGC TGGTGCGCAG GTGTCTGTGG CAGGCGGGGG TCTCCAACCC CATGAGGCAG
CTGTCCCTCA TAGCGGTTAC CGCCGGGCCG GGCCTCATGG GCTCCCTGCT GGTGGGGGTT
ATGGCCGCCA AGGGACTGTC CCAGGGTTGG GAGGTGCCCA TCATGGGGGT GAACCACATG
GAGGGGCACC TCTTCGCCAA CGTGCTGGCC CACCCGGATC TCAAGCCCCC GTTCCTGTGC
CTCATTGTGT CCGGGGGCCA CACGGAGGTT CACCTGGTCA GGTCCTTCGG GGACTACCGG
CTGCTGGGGG CCACCCGGGA CGACGCGGTG GGGGAGGCCT ACGACAAGGT GGCCAAGATG
CTTGGGCTGG GGTACCCCGG TGGGCCGGTG ATCGACCGCC TGGCCCGGGA GGGGGACCCG
GACAGGTACC AGTTGCCGGT GCCCTTCAAG GGGAGCTCCC AGGTGGAGTT CAGCTTCAGC
GGTCTCAAGA CCGCGGTGCT CTGGCTGGTG CGTCGGGAGG GGGAGGCCCT TTCGGTGCCG
GACCTTTGCG CCTCCTTTCA GAGGGCGGCG GTGGAGTCCC TGGTGTCCAA GGTGAAGCTG
GCCATGAACC AGACCGGGGT CCGGACCGTG GCGGTGTCCG GGGGCGTGGC GGCCAACCGG
GAGCTTCGCC GGAGGCTGGA GGACCTGGCG GGCTCCTCCG GCGGGAGGGT CCGGGTCTAC
CTGCCCCCCC TGGAGCTGTG TACCGACAAC GCCGCCATGG TGGCCGCCGC TGGTCTTTGG
GCCTACCGGC GTGGTGTCAG GGACGACCTC AGCTTCCGGG CGGACCCCTC CTGGGAGTTG
AGCCGCTAA
|
|---|
| Protein sequence | MTMDSPFLVL GIESSCDDTA VAVLEEPRRI RASLVMSQVE DHAPHGGVVP ELASRRHQEA
IMGLVRRCLW QAGVSNPMRQ LSLIAVTAGP GLMGSLLVGV MAAKGLSQGW EVPIMGVNHM
EGHLFANVLA HPDLKPPFLC LIVSGGHTEV HLVRSFGDYR LLGATRDDAV GEAYDKVAKM
LGLGYPGGPV IDRLAREGDP DRYQLPVPFK GSSQVEFSFS GLKTAVLWLV RREGEALSVP
DLCASFQRAA VESLVSKVKL AMNQTGVRTV AVSGGVAANR ELRRRLEDLA GSSGGRVRVY
LPPLELCTDN AAMVAAAGLW AYRRGVRDDL SFRADPSWEL SR
|
|---|
| |