| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1023 |
|---|
| Symbol | |
|---|
| ID | 8630863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 1065962 |
|---|
| End bp | 1066855 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003317537 |
|---|
| Protein GI | 269792633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0854512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCCTT TGGGGGAGAA CGGGCCGCTG GATCCAAGGA TGGAGTCCTT CCTGGAGTAC
CTCTCCCTTG AGAGGGCCTT CAGCCCCAAC ACATGTCAGG CCTACAGGAG GGATCTCTCT
AAGTACGTCT CCTTCTGCGC CGAGAGGGGG CGGGATCCAG TGCCGCCGGA GGTGGACACG
GTGAGCCTGT TCCTAGCTAG CCTGAGGTCC CAGGGGGCCG CCAAGAGCTC GGTTCAGCGG
GCGGCGGCGT GCATAAAGTC CTTCAGCCGC TTCCTGGGCG AGGTGGGGGA GGACCCGGGG
AAGGTTCCCA TGTTGCCCGA CAAGCCCTCC CCTATGCCGG CCATCCTGAC CGAGGGGGAG
GTCCTTCGCC TCCTGGAGGC CACCGCCGGA GATGCCCCCG GGGACCTGAG GGATCGGGCC
ATGATAGAGC TCCTCTACGG TTGCGGTTTG AGGGCCTCGG AGCTCTGTTC CCTGACCATG
AAGGACCTGG ACCTGTCATC CGGCACCGTC CGGGTGAGGG GGAAGGGGGA CAAGGTGAGG
GTCCTTCCCC TGGTGGGGGA GACCAGGTCC GCCCTGGAGC GCTACCTGAA GGTGAGGGGG
ACCCACCAGG GGCCGATCTT CCAGGGGGAC AGAGGAGGTC CCTTTAGGCG GGAGATGCTC
TGGAAGATGA TCCAACGGAG GGGCCGGCAG GCGTGTATAG CCGCCTCCAG GCTTCATCCC
CACATACTGA GGCACTCCTG CGCCACGCAT CTGCTGAGGC GGGGGATGGA CCTGAGGACC
CTGCAGTGTC TGCTGGGTCA CTCCTCGGTG AGGACCACCG AGGTCTACAC CCACTTTGAC
CTGGAGCTGA GGGACGTTTA CGATAGAAGT CATCCTAGAG CACAAGGGAG TTGA
|
|---|
| Protein sequence | MSPLGENGPL DPRMESFLEY LSLERAFSPN TCQAYRRDLS KYVSFCAERG RDPVPPEVDT
VSLFLASLRS QGAAKSSVQR AAACIKSFSR FLGEVGEDPG KVPMLPDKPS PMPAILTEGE
VLRLLEATAG DAPGDLRDRA MIELLYGCGL RASELCSLTM KDLDLSSGTV RVRGKGDKVR
VLPLVGETRS ALERYLKVRG THQGPIFQGD RGGPFRREML WKMIQRRGRQ ACIAASRLHP
HILRHSCATH LLRRGMDLRT LQCLLGHSSV RTTEVYTHFD LELRDVYDRS HPRAQGS
|
|---|
| |