Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_36810 |
Symbol | |
ID | 8635314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 4115221 |
End bp | 4116087 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC-type metal ion transport system, periplasmic component/surface adhesin |
Protein accession | YP_003316401 |
Protein GI | 269796946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00286711 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.394696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGCT CCCCCGCCGC CCTCGCCGCG ACCGCCCTCG CCGCCTGCGC CTTCCTGACC GCCTGCTCCG ACACCGACGC ATCCGCTGAC GGCACCGTCG ACGTGCTCGC GTCGTTCTAC CCGCTCCAGT ACGTCGTCGA GCAGGTGGGG GGCGAGCACG TGACGGTCTC GAACCTCACG CCGCCCGCCG CCGAGCCGCA CGACCTCGAG CTCTCCCCCG CCCAGGTGCG CGGCATCGGG ACGGCGGACC TCGTCGTGTA CCTGTCAGGC CTGCAGGCAG CGACCGACGA GGCGGTCTCC GCACAGTCCC CCGAGCACGT GGTGGACTCC GCCGAGGCCG CGGAGGCGGA CGCCGCCGAC CCGCACTTCT GGCTCGAGCC GACACGGCTG TCGATGGTCG GTGACGCCGT GGCCGCCGAG CTCAGCGCGA TCGACCCCGA CAACGCGGCC GACTACGCCG CGGGGGCCGA GGCTCTCACC GCGACGCTCG ACGGGCTCGA CGAGGAGTTC TCCGAGGGGC TCGCACAGTG CGAGGGCGCC ACGCTGGTCA CCTCGCACGA GGCCTTCGGC TACCTGGCCG ACCGGTACGG GCTCGTCCAG GAGGGCATCT CAGGCATCAA CCCCGACGCC GAGCCCTCCC CCAAGCGCCT GCGCGACGTG CGCGCGATCG TCGAGCGCGA CGGCGTCTCG ACGCTGTTCT TCGAGCGCTC GCTCGGCCCC AAGGTCACCC AGACGCTCGC CGACGACATC GGCGTCTCGA CCGCGCTCCT CGACCCCCTC GAGAGCCGCA CCGACGAGTC CCGCGACTAC GTCGACATCA TGCGCGCCAA CCTCGAGGCC CTCACCACCG GCCTCGCCTG CGACTGA
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Protein sequence | MRRSPAALAA TALAACAFLT ACSDTDASAD GTVDVLASFY PLQYVVEQVG GEHVTVSNLT PPAAEPHDLE LSPAQVRGIG TADLVVYLSG LQAATDEAVS AQSPEHVVDS AEAAEADAAD PHFWLEPTRL SMVGDAVAAE LSAIDPDNAA DYAAGAEALT ATLDGLDEEF SEGLAQCEGA TLVTSHEAFG YLADRYGLVQ EGISGINPDA EPSPKRLRDV RAIVERDGVS TLFFERSLGP KVTQTLADDI GVSTALLDPL ESRTDESRDY VDIMRANLEA LTTGLACD
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