Gene Sked_36620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36620 
Symbol 
ID8635295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4097713 
End bp4099344 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content73% 
IMG OID 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_003316382 
Protein GI269796927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0835028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.811978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA CCGCCACGAC CCCCACCGCA CGGCGCAACC TCCTCTCGCG GTTCACCGAC 
CTCGGTGTCC GCGTGAAGGT CCTCGCGGCG ATCGCGCTCT CGACGGCCGT CGCCGTGCTC
GTCGGTGTCC TCGGCCTGCT CGCGCTCGCG AGCTCGGCCG CGACCACCGA GTCCGTCTAC
GGCGAGAACA CCCTGGGGAT CCGGTACGCG ACCGCGATGG AGGTCGCGGC CGGCACCATG
CAGCAGGTCG CGCGGGACGC GATCCTCTCC CAGAACGACG CCGCGTACCT GCAGAGCGTC
CGGGCGCTCG ACCTCGCGGA GCAGAGCTTC CGGGACGCGC AGGCCTCGTA CGCCCAGACC
CCCCTCGACG GCGGCCGGCA GCAGACGCTC GACGACCTCA GCACGGCGGT CGACCGCTAC
CTGGCGCTCC AGCGCGACCT GCTCGCGCCC CTCGCCGAGG CCGGCGAGAC CTCCGCGTGG
GTGACGGCCA ACGCCAACGA GGTGCGACCC GTCACGAGCC AGATGACGGC CTTCATCACC
GCCCTCGTGG ACGCCGAGAC CACCCGCGCC CTGGAGGCCG TCTCCGGCTC GAGCGACGCC
TACGAGCGGC AGCGGCTCGT CTCCGTCGTG ATCCTCGTCG TCGGCGCCGT CGTCGCCCTC
TCGCTCGGCT GGTTCGTGGC GCGTGACGTC GCACGCAGCG CGGCACGCGT GCAGGAGGTC
GTCGAGGGGC TGGCCGCGGG CGACCTCACC GGGTCCACGG GGATGACCTC TCGGGACGAG
CTCGGCCGCA TGGGTGCCGC GCTCGACGGC GCCCTGGTGA GCCTGCGCTC GGTCATGACC
AGCGTGGTGC GGTCCTCCGA CTCGGTGGCC GCGGCCTCCG AGCAGCTCTC GGCGAGCTCG
CAGCAGATCG CCGCGGGAGC CGAGGAGACC TCGGCGCAGG CCGGGGTCGT CTCGGCAGCA
GCCCTCGAGG TGTCGGGCAA CGTGCAGACC GTGGCCGCCG GCGCCGAGGA GATGGGGGCG
TCGATCCGCG AGATCTCGCA GTCCGCCAAC GACGCCGCGC GCGTGGCCGC CGAGGCCGTG
ACCGCCGCCC AGGACGCGAC CGGGTCGGTC GCCCAGCTCG GCACCTCGAG CCAGCAGATC
GGCGACGTGG TCCGCGTGAT CACGACCATC GCCGAGCAGA CCAACCTGCT CGCCCTCAAC
GCGACCATCG AGGCTGCCCG GGCGGGAGAG TCCGGCAAGG GCTTCGCGGT CGTGGCCTCG
GAGGTCAAGG AGCTCGCGCA GGAGACCGCC CGCGCGACCG AGAGCATCGG GCGGCTCGTC
GCGACCATCC AGACCGACAC CGTCGGCGCG GTGGGTGCGA TCGAGCACAT CTCCGGCGTC
ATCACGTCGA TCAACGACTA CCAGCTGACC ATCGCCTCGG CCGTCGAGGA GCAGACCGCG
ACGACCACCG AGATGAGCCG CAACGTCGCC GACGCGGCCA CCGGCGCCGG GCAGATCGCC
ACGACCATCA CCGGCGTCTC CGGCGCCGCC GACTCGACGA CGCAGGCGCT CGCGCAGACT
ACGGCTGCCG TCGACGAGCT CGCGCTCATG GCTGCCGAGC TCCGGGCGTC GGTCGCGACC
TTCACGTACT GA
 
Protein sequence
MTSTATTPTA RRNLLSRFTD LGVRVKVLAA IALSTAVAVL VGVLGLLALA SSAATTESVY 
GENTLGIRYA TAMEVAAGTM QQVARDAILS QNDAAYLQSV RALDLAEQSF RDAQASYAQT
PLDGGRQQTL DDLSTAVDRY LALQRDLLAP LAEAGETSAW VTANANEVRP VTSQMTAFIT
ALVDAETTRA LEAVSGSSDA YERQRLVSVV ILVVGAVVAL SLGWFVARDV ARSAARVQEV
VEGLAAGDLT GSTGMTSRDE LGRMGAALDG ALVSLRSVMT SVVRSSDSVA AASEQLSASS
QQIAAGAEET SAQAGVVSAA ALEVSGNVQT VAAGAEEMGA SIREISQSAN DAARVAAEAV
TAAQDATGSV AQLGTSSQQI GDVVRVITTI AEQTNLLALN ATIEAARAGE SGKGFAVVAS
EVKELAQETA RATESIGRLV ATIQTDTVGA VGAIEHISGV ITSINDYQLT IASAVEEQTA
TTTEMSRNVA DAATGAGQIA TTITGVSGAA DSTTQALAQT TAAVDELALM AAELRASVAT
FTY