| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_36270 |
|---|
| Symbol | |
|---|
| ID | 8635260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 4058345 |
|---|
| End bp | 4059799 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | predicted multitransmembrane protein |
|---|
| Protein accession | YP_003316347 |
|---|
| Protein GI | 269796892 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCGAC CTGAGAACGA TTCCCGGCAG CGCGGGGCGC ACAGCACGCA CGAGGGGCAC
GACGGGCACG GCGCGCACCA CCACGCGCAG CCCGACGCCC CGACCGCAGA CGACCGCTGC
GAGCACTGCG GCCGCCACGG CGACGCAGGG GCGCCGGCCG GCACCGCGGC AGGCTCGACG
ACCACGGCTC CGTCCGGCGA CGTCCTCGTG CACGGCCACG GTCACGGCCC GGCGCCGAAG
GCGTCGCGCC GGGTGCGGAC GATCCTCGCG GCGTTCCTCG TCCCGATCCT GCTGCTGACG
GTCGTCGGGC TCGTGCTGCT GTGGCCGCAC GGCGCCCCCG AGCGCGGCAC CATCGACACG
ACGGCCGACA CCGCCGGCAA GCTCTACGGC GTCGTCACGG GCGAGCCGGT CGACAACCTC
GTGCCGGTGA CCCTCGACGA CACCGGCGAG CAGATCCAGG TGATGTTCCC GCCGGACTAC
CTGGCCCTCG GGGTGGACGT CGGCTCGACG CTCAAGATCC TGCACATCCC GCAGGCGGCG
GCGTCGGGCA GCGAGTACGT GTTCATGGAC TACACCCGTG ACCTGCCCAT CGGGCTGCTC
ACCGTGGCGT ACCTGGTCGT GGTGCTCGCG GTCGCCGGGT GGCGGGGCCT CGCGTCGGTC
GGAGGGCTCG TCATCTCCTT CGTGGTGGTG GTGACCTTCA CGCTGCCCGC CCTGCTGGTG
GGGACCAACC CGGTGGGCGT CGCGCTCATC ACCTCGGCGG TGGTCATGTT CGTGGTCCTC
TACCTGGCGC ACGGCTTCAC GGCGAGGACC TCGGCGGCGC TGCTGGGGAC CATCATCGGC
CTCGTCATCA CGACGGGGCT GGCCGGGTGG GCCGTCGACG CCGCGAACAT CTTCGGGCTG
TCCGACGAGT ACGCCCTCGC CCTGCCCGCC TACGCCCCCG ACGTCGACAT CCGCGGGATC
GCGGTCTGCG GCATCGTGCT CGCCGGTCTC GGTGTGCTCA ACGACGTGAC CATCACCCAG
GCGTCGTCGG TGTGGGAGCT GCGGGCCGTG AGCCCCACCA TGAACCGCCG TGACCTGTTC
CTGCGCGGCA TGCGCATCGG CCGGGACCAC ATCGCCTCGA CCGTCTACAC CATCGCCTTC
GCGTACCTCG GCGCGGCGCT GCCGATGCTG CTCATGGTCT CGCTCATCGA CATGGGCCTC
GGCGAGACCC TCACCTCGGG CGAGATCGCC CACGAGGTGG TCCGCACGCT CGTCGGCTCC
ATCGGCCTGG TCCTCGCCAT CCCGATCACC ACCGGCATCG CGGCCCTGGC CGTCGGCGGC
CACGACTCCC TCGGCCCGGT GCCGGGGACC CACACCTCGG AGCCCGTGGC GCCCGGGGCG
ACGCCCACGT CGACCGGCAC GCGACCCGCG CTCCCGACGC GTGCCGCGTT GCGTGGGGCT
CGCAAGGGTC GCTGA
|
|---|
| Protein sequence | MTRPENDSRQ RGAHSTHEGH DGHGAHHHAQ PDAPTADDRC EHCGRHGDAG APAGTAAGST
TTAPSGDVLV HGHGHGPAPK ASRRVRTILA AFLVPILLLT VVGLVLLWPH GAPERGTIDT
TADTAGKLYG VVTGEPVDNL VPVTLDDTGE QIQVMFPPDY LALGVDVGST LKILHIPQAA
ASGSEYVFMD YTRDLPIGLL TVAYLVVVLA VAGWRGLASV GGLVISFVVV VTFTLPALLV
GTNPVGVALI TSAVVMFVVL YLAHGFTART SAALLGTIIG LVITTGLAGW AVDAANIFGL
SDEYALALPA YAPDVDIRGI AVCGIVLAGL GVLNDVTITQ ASSVWELRAV SPTMNRRDLF
LRGMRIGRDH IASTVYTIAF AYLGAALPML LMVSLIDMGL GETLTSGEIA HEVVRTLVGS
IGLVLAIPIT TGIAALAVGG HDSLGPVPGT HTSEPVAPGA TPTSTGTRPA LPTRAALRGA
RKGR
|
|---|
| |