Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_35870 |
Symbol | |
ID | 8635220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 4012640 |
End bp | 4013797 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | pyruvate dehydrogenase E1 component, alpha subunit |
Protein accession | YP_003316307 |
Protein GI | 269796852 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.150997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGCAC CGATCGAGCC GACCGAGGCT CTCCAGACCG ACGAGGACGC ACCCGTCCAG CTCGTCGCAC CCGACGGCAG CCGGGTCTCC GACGACCGCA ACGCGCCCTA CCGGGCCCGC ACCAGCCACC TCGGCACCGA GGAGCTCCGC GGCCTCTACC GCGACATGGT CCTGGTCCGA CGCTTCGACA CCGAGGCCAC CGCCCTCCAG CGCCAGGGCG AGCTCGCGCT CTTCGCGCCG CTCCTCGGCC AGGAAGCCGC GCAGATCGGC TCCGGACGAG CGCTCGCCCC CCAGGACGTG GCCTTCCCGT CCTACCGCGA GCACGGCGTC GCGCACACCC GCGGCCTCGA CCTCGCCGAG ATCCTCCGCC TGTTCCGCGG GGTCGACCAC GGCGGCTGGG ACTCCGAGGC CCACAACTTC CACCTCTACA CCCTGGTCAT CGGGTCGCAC TCGCTCCACG CGACCGGCTA CGCCATGGGC GTCCAGCGCG ACGGCCTCGT CGGCACCGGC GACCCCGAGC GCGACACCGC GGTCATCACG TACTTCGGCG ACGGCGCGAC CTCGCAGGGC GACGTGAGCG AAGCCCTCGG CTTCGCGGCC GTGAACAACG CCCCCGTCGT GCTGTTCTGC CAGAACAACC AGTGGGCCAT CTCCGTCCCG ACCTCGACCC AGTCCCGCGT GCCGCTGTAC CGCCGCGGTG CCGGCTTCGG GGTCCCGAGC GTCCGCGTCG ACGGCAACGA CGTCCTCGCC TGCTACGCCG TGACCGCCGA GGCCCTCGAG CGCGCCCGCA GCGGCGGCGG CCCCACCTTC ATCGAGGCCG TCACGTACCG CATGGGCGCG CACACCACCT CGGACGACCC CACGCGCTAC CGCACCCGCG CCGAGGAGGA CTACTGGCGC GACCGCGACC CGATCGCCCG CCTGCACGCG CTCCTCGTCG CCGAGGGCGC CTGGGACGAC GAGGCCGCCG CAGCCCTCGA GGCCGAGTCC GAGGCCCTCG GCGAGCGGAT CCGCACGAGC GTCCGCGCGC TCGGCAAGCC CGCCGCCGCA TCCATGTTCG ACCACGTGTA CGCGACCGAC CACCAGGTCG TCTCCCGCGA GAGCGCGTGG TTCGAGTCCT ACGAGTCGTC CTTCACGGAC CAGGGAGGCC ACCGATGA
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Protein sequence | MTAPIEPTEA LQTDEDAPVQ LVAPDGSRVS DDRNAPYRAR TSHLGTEELR GLYRDMVLVR RFDTEATALQ RQGELALFAP LLGQEAAQIG SGRALAPQDV AFPSYREHGV AHTRGLDLAE ILRLFRGVDH GGWDSEAHNF HLYTLVIGSH SLHATGYAMG VQRDGLVGTG DPERDTAVIT YFGDGATSQG DVSEALGFAA VNNAPVVLFC QNNQWAISVP TSTQSRVPLY RRGAGFGVPS VRVDGNDVLA CYAVTAEALE RARSGGGPTF IEAVTYRMGA HTTSDDPTRY RTRAEEDYWR DRDPIARLHA LLVAEGAWDD EAAAALEAES EALGERIRTS VRALGKPAAA SMFDHVYATD HQVVSRESAW FESYESSFTD QGGHR
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