Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_35850 |
Symbol | |
ID | 8635218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 4009638 |
End bp | 4011293 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component |
Protein accession | YP_003316305 |
Protein GI | 269796850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.459996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCT TTGAGCGCTT CAACATGCCG GACGCCGGCG AAGGCCTCAC CGAGGCAGAG ATCGTCGCGT GGCACGTCTC GGTCGGCGAC ACCGTCACCG TGAACCAGAC GATCGTCGAG ATCGAGACCG CGAAGTCGCT CGTCGAGCTG CCCTCGCCCT ACGGCGGGGT CGTCACCGAG ATCATCGAGC AGGTCGGCAC CGTCGTCGAG GTCGGCCAGC CGATCATCGT CGTGGACACC GACCCGCACG GTGCGGCGCC TGCTGAGTCT GCGGGGTCCG TTGGGACCAC GGCTCCGCAG GGCGGCGAGG CCAGCGCCGA CGACAGCACC CCGACCACCC CGGACGCCGA CGCCTCGACG TCCGGCTCCG AGGGCTCGGG GGCCGTGCTC GTCGGCTACG GCGTCGCGAC CGGTGGGACC ACGCGCCGTG CGCGTCGCGC GGCAGAGCCG GCAGCGGGGT CGTCGGCAGC AGGGTCGTCG GGAGCAGAGG CGACGGCAGC CGGCGCGCGC GCGGCGACGC CGGTCGCGCA GCAGCCGGCA GCACCGGCCG CTACCGAGAC GCCCGCAGCC CGCCCGGCTG CGACCCAGCA GGCGGCGGGG ATCCAGCCCG CACAGCCTCC GGCGGCGCTC GCCCCGCAGC GTCCGACCAC GCAGCGCCCC GCCACCGCTC CCGCCGGAGC CGTGGCGCCG GCGGCCTTCG CGGCGCAGTC CGTCGGGTCC GTCTCGCAGG TCGCGCCACG GCCGGGGTCG CTCGCCGTCC GCGCCAAGCC TCCCGTCCGC AAGCTCGCCC GCGACCTCGG TCTCGACCTC TCGAGCGTCC CGGCGACCGG GCCCGGCGGC ATCGTCACCC GAGAGGACGT GCTCGCGTAC AGCGCCCAGG CGCAGCCCCG AGCCCTGGCG ACCTACGTCG ACGACGACGC CCCGTGGCTC GCGTCGGGCC AGGTGTCCTC CGACGGGCGC CAGACCCGCG TCCCGGTCAA GAGCGTGCGC AAGCGCACCG CCGAGGCGAT GGTCTCGAGC GCCTTCACCG CGCCGCACGT CACGGTGTTC CAGACCGTCG ACGTCACCAA GACGATGCGT CTGCTCGACC GGCTCCGCAA GGACCGCGAG TTCACCGACG TGCGCGTCAC GCCGCTGCTC ATCACCGCCA AGGCGCTCCT GCTGGCCGTC AACCGGCACC CCGAGATCAA CGCGAGCTGG GACGAGAAAG CCCAGGAGAT CGTCTACAAG CACTACGTGA ACCTCGGCAT CGCCGCGTCG ACGCCGCGCG GCCTCGTGGT CCCCAACATC AAGGACGCCC ACCGGCTCGG GCTCAAGTCC CTCGCCCAGG GGATCGCCGA CCTCACCGCC ACGGCCCGCG CCGGACGCAC CAGCCCGACC GACATGTCCG ACGGCACCAT CACCATCACC AACGTCGGGG TGTTCGGCAT CGACACCGGG ACGCCGATCC TCAACCCCGG CGAGGCCGCG ATCCTCGCCT TCGGCGCCAT CCGCGAGCAG CCCTGGGTGC ACAAGGGCAA GATCAAGAAG CGCTTCGTCA CCCAGCTCGC GCTGAGCTTC GACCACCGCC TGGTCGACGG CGCCCTCGGG TCTCGGCTGC TCAGCGACGT CGCCGCGGTG CTCGAGGAGC CGGCCCAGGC GCTCGTCTGG GGCTGA
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Protein sequence | MPTFERFNMP DAGEGLTEAE IVAWHVSVGD TVTVNQTIVE IETAKSLVEL PSPYGGVVTE IIEQVGTVVE VGQPIIVVDT DPHGAAPAES AGSVGTTAPQ GGEASADDST PTTPDADAST SGSEGSGAVL VGYGVATGGT TRRARRAAEP AAGSSAAGSS GAEATAAGAR AATPVAQQPA APAATETPAA RPAATQQAAG IQPAQPPAAL APQRPTTQRP ATAPAGAVAP AAFAAQSVGS VSQVAPRPGS LAVRAKPPVR KLARDLGLDL SSVPATGPGG IVTREDVLAY SAQAQPRALA TYVDDDAPWL ASGQVSSDGR QTRVPVKSVR KRTAEAMVSS AFTAPHVTVF QTVDVTKTMR LLDRLRKDRE FTDVRVTPLL ITAKALLLAV NRHPEINASW DEKAQEIVYK HYVNLGIAAS TPRGLVVPNI KDAHRLGLKS LAQGIADLTA TARAGRTSPT DMSDGTITIT NVGVFGIDTG TPILNPGEAA ILAFGAIREQ PWVHKGKIKK RFVTQLALSF DHRLVDGALG SRLLSDVAAV LEEPAQALVW G
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