| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_35540 |
|---|
| Symbol | |
|---|
| ID | 8635187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3972495 |
|---|
| End bp | 3973640 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Pirin-related protein |
|---|
| Protein accession | YP_003316275 |
|---|
| Protein GI | 269796820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACC TCGACGCCGC CCCGACCGAG CAGACCTGCG CCTCCGGGCA GAGCAGGCAG
GCGGACGGCA GCGGGCAGAG CAGCCAGCCT GCCCCGGGCC GAACGGGGCA TCAGGCGCAC
CAGGTCGGCG TGGAGATCCT CGAGCCCCGT GAGGTCCCGC TCGGTGGGGC CCGCGCCATG
ACCGTCCGGC GGACGCTGCC GCAGCGCGCC CGCAGCATGG TCGGCGCGTG GTGCTTCCTC
GACCACTTCG GGCCCGACGA CGTCACGGCC GGGCCCGGCA TGCAGGTGCC ACCGCACCCG
CACACCGGCC TCCAGACCGT CACCTGGCTG TTCGCCGGCG AGATCGAGCA CCACGACTCC
GTCGGCTCCG ACTGCCGCGT CCGCCCGGGA GAGCTCAACC TCATGACGTC GGGCCACGGC
ATCTCCCACT CTGAGCACTC GCCCGACGAC CGCACCACCA CCACGCTGCA CGGCGTCCAG
CTGTGGACGG CGCTCCCGCA CGCGAGCGCC GACGTGGCCC CCGCCTTCGA GCACCACGAG
GACCTCCCGG TGCTCCAGGC GGCAGGAGCC CGGGTCCAGG TGTTCCTCGG CGCGCTCCCG
GCCCAGCCCG GGCTCGGCCG TCCCGAACCT CTCGTCTCTC CCGCCACCAC CTACACCGAG
CTGCTCGGCG CACAGGTCGA CCTCGAGGCC GGCGCGACCC TCGTGCTCCA GGTCGACCCG
GACCACGAGC ACGCCGTCCT CGTCGACTCG GGCGAGGGCG TCACGGTCGA CGGCGAGCAG
GTCGTGGCCG ACCACCTCGG GTACGTCGCC CCCGGCCGCC GCGGGCTCGC GCTCACCACG
ACCACGCGCG CCCGGCTCGT GCTCCTCGGC GGACGGCCCT CGACCGAGGA GATCGTCATG
TGGTGGAACT TCGTGGGGCG CAGCCACGAC GAGGTGGTCG CCGCACGTGC CGACTGGCAG
CGGCAGAACG GGCACGCAGA CCGCGACACC CTCGACGCCG GACGTACCCC CACCGGGCAG
GAGTCACCAT CGACCAGCCG ACCCGGCGAC GCTAGGTTCG GGACCGTCGT CGGCTACGAC
GGCGCACCGC TCCCCGCGCC CGTCCTGCCC AACGTGCGCC TCGCACCCCG GAGGAACCCG
AGCTGA
|
|---|
| Protein sequence | MSNLDAAPTE QTCASGQSRQ ADGSGQSSQP APGRTGHQAH QVGVEILEPR EVPLGGARAM
TVRRTLPQRA RSMVGAWCFL DHFGPDDVTA GPGMQVPPHP HTGLQTVTWL FAGEIEHHDS
VGSDCRVRPG ELNLMTSGHG ISHSEHSPDD RTTTTLHGVQ LWTALPHASA DVAPAFEHHE
DLPVLQAAGA RVQVFLGALP AQPGLGRPEP LVSPATTYTE LLGAQVDLEA GATLVLQVDP
DHEHAVLVDS GEGVTVDGEQ VVADHLGYVA PGRRGLALTT TTRARLVLLG GRPSTEEIVM
WWNFVGRSHD EVVAARADWQ RQNGHADRDT LDAGRTPTGQ ESPSTSRPGD ARFGTVVGYD
GAPLPAPVLP NVRLAPRRNP S
|
|---|
| |