Gene Sked_35080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_35080 
Symbol 
ID8635141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3920581 
End bp3921618 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content73% 
IMG OID 
Productsiderophore-interacting protein 
Protein accessionYP_003316230 
Protein GI269796775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CAGCGACGAC CGAGACCGTC ACGCGTGCCG AGCCCGCCTA CCGTGTCTTC 
GACGTCACCG TCGCCCGGGT GCAGGAGCTC AGCCCGTCGT TCGTGCGTGT CACCTTCACG
GGGCCTGACG CTGCGGCCTT CGGCACCGAC GGGCTCGACC AGCGCATCAA GCTGGTGCTC
CCCAACGAGG CCGGGCACCG TCCCGACGCC GCCGACTTCG AGGGTGACTC CTGGTACGCC
GCGTGGCGCG AGCTCCCTGA CGAGCTCCGC TGCCCGCTGC GCACCTACAC GGTCCGCGCC
GTCCGTCCGC ACGTCGGCCT CGGCGAGGTC GACGTCGACA TGGTGGTCCA CGTGTCCGAC
GACGGCCACG ACGGCCCCGC CGCGCGCTGG CTCCAGACCG TCGAGACCGG CACGCCCTGC
GTCCTCATCG GTCCGAACGC TCGCTACGAC GGCCCGGCGT CGGGCATCGA GTGGGCGCCG
CCCGCGTCGG CCACCACCCT CGTCCTCGCG GGTGACGAGA CCGCGGCCCC GGCCATCTGC
TCCATCCTCG AGTCCCTCGC CCCCGGTACC GAGGCGCAAG CCTTCGTCGA GGTCCCGCTC
GAGGCCGACG CACTCTCGCT CACCCTGCCT GCCGGGGCGT CGATCACCTG GCTGCCGCGC
AGCCGCGGCG GATCCGACCC CGTCGAGCAC GGCAGCCTCC TCGACGGCGC GGTCCGCGCC
CACATGCAGC TCTGCGCCGC CAAGCAGGCT GCCGGCCTGT GCGACACCTC GTGCCACGAC
GTGCCCATCG AGCGCATCAG CCTGCCCAAG GGCCAGCCCG CTGCGGAGCT CGAGGACGTC
GACGTCGACA CCACCATCCT CTGGGAGGTC CCGACCGCCG ACACGTCGGC CGGGCCCCTC
ACCGACTGCT ACGCCTGGAT CGCCGGAGAG GCTGGCGTCA TCAAGCTCCT CCGCCGCCAC
CTCGTGAGCG ACCTCGGCAT CGACCGCCGC TCCGTCGCCT TCATGGGCTA CTGGCGCCGC
GGCAAGGCCG AGGGCTGA
 
Protein sequence
MTTTATTETV TRAEPAYRVF DVTVARVQEL SPSFVRVTFT GPDAAAFGTD GLDQRIKLVL 
PNEAGHRPDA ADFEGDSWYA AWRELPDELR CPLRTYTVRA VRPHVGLGEV DVDMVVHVSD
DGHDGPAARW LQTVETGTPC VLIGPNARYD GPASGIEWAP PASATTLVLA GDETAAPAIC
SILESLAPGT EAQAFVEVPL EADALSLTLP AGASITWLPR SRGGSDPVEH GSLLDGAVRA
HMQLCAAKQA AGLCDTSCHD VPIERISLPK GQPAAELEDV DVDTTILWEV PTADTSAGPL
TDCYAWIAGE AGVIKLLRRH LVSDLGIDRR SVAFMGYWRR GKAEG