Gene Sked_34990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34990 
Symbol 
ID8635132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3912520 
End bp3913605 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content75% 
IMG OID 
Productpredicted flavoprotein involved in K+ transport 
Protein accessionYP_003316221 
Protein GI269796766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.675799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGACG TCGTGGTCAT CGGGGCAGGG CAGGCCGGGC TGTCGGCCGC CTACCACCTG 
CGCCGGAGCG GGCTCGAGCC TGGCGAGCAC ATGGTCGTGC TGGACTCGAG CGACGGGCCC
GGCGGCGCCT GGCGCGAACG CTGGGACTCC CTCACCCTCG GCGCCGCCCA CGGCATCCAC
GACCTGCCCG GCCTGCCGAT CGGTGCCCCC GACCCGACCG AGCCCGCGTC GGTCGCGGTC
AGCCGCTACT ACGGCACCTA CGAGGAGACC TTCGGGCTCG ACGTCGTCCG ACCGGTCCGC
GTGCGCGACG TCCGCCCGCT CGAGGGGCCC GACGGGCCCG TGGACGTCGA CGACCGCGGT
GTCGACCGAG GCTCACCGCT CGTCGTCAGC TCCGACGCAG GCTCGTGGAC CACCCGCACG
GTCGTCAGCG CCACCGGCAC CTGGACGCGG CCCTACTGGC CCGCGTACCC CGGGCGCGAG
ACCTTCCTCG GGCGGCAGCT CCACACCCAC GACTTCGTCT CCGCCGAGGA GCTCCGCGGC
CAGCACGTGG TCGTCGTCGG CGGTGGGGCC TCGGCCGTCC AGTTCCTGCT GCAGCTCGCC
AAGGTCACCA CGACCACCTG GGCCACCCGG CGGCCGCCCG TCTTCGACGA CCGAGCCTTC
GACCAGGAGT GGGGGCGCGA CGTCGAGCGC CGCGTGGTCG AGCGGACCTC CGCCGGCCTG
ACCACCCTGA GCGTCGTCGG TGCCACCGGC CTTCCGCTCA CGCCCGTCTA CCAGCAGGGC
ATCGACGACG GCGTGCTCGT CTCCCGCGGG ATGTTCACCG AGATCACGCC CACCGGGGTC
GTGTTCCCCG ACGGAGAGGT CCGCGCCGAC GTCATCCTCT GGGCCACCGG CTTCCGGCCC
GCCGTCGACC ACCTCGCGCA GTTGCGCCTG CGCGAGCCCG GCGGTGGCAT CGCGACGGAC
GGCGTCCACG TCGACCGCGA CCCCCGCGTG CTCCTCGCCG GCTACGGCTC AGGTGCGTCG
ACCATCGGCG CCACCCGCGC GGGGAGGGCC GCGGCGCTCG CGGCCGTGGC GCGCCGCGCA
GCCTGA
 
Protein sequence
MYDVVVIGAG QAGLSAAYHL RRSGLEPGEH MVVLDSSDGP GGAWRERWDS LTLGAAHGIH 
DLPGLPIGAP DPTEPASVAV SRYYGTYEET FGLDVVRPVR VRDVRPLEGP DGPVDVDDRG
VDRGSPLVVS SDAGSWTTRT VVSATGTWTR PYWPAYPGRE TFLGRQLHTH DFVSAEELRG
QHVVVVGGGA SAVQFLLQLA KVTTTTWATR RPPVFDDRAF DQEWGRDVER RVVERTSAGL
TTLSVVGATG LPLTPVYQQG IDDGVLVSRG MFTEITPTGV VFPDGEVRAD VILWATGFRP
AVDHLAQLRL REPGGGIATD GVHVDRDPRV LLAGYGSGAS TIGATRAGRA AALAAVARRA
A