Gene Sked_34730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34730 
Symbol 
ID8635106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3881467 
End bp3882045 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003316195 
Protein GI269796740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.169686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCA TGACCACCGA CGACCTCCGC GAGAGCATCA TCGACGCCGC TGACAGGCTC 
TACTACGCCA AGGGGTACGC GGCCGTCGGC ATGGACGAGC TCCGCACCGA GGCCGGCGTC
TCGCTGCGGC GCCTCTACAC GGTCTTCGCG TCCAAGGACG ACATCGTCCT GGCGGTCCTC
GACCGGCGCC ACCAGACCTG GGAGAGCGGC CTCGCCGAGA GCGTCGCCCG GGCAGCCGAC
CCGCGAGACA GGCTCCTGGC CATCTACGAC TACCTCGCCG ACTGGTTCTG CGACGACGAG
TTCCGCGGCT GCGGGTTCAT CAACGCCTTC GGCGAGCTCG GCGGCACGCG CCCCGCCGTC
GCCGAGGCCG CCCGCGAGCA CAAGGCCTCC TTCCAGCGCT ACGTCGCCGG CCTCGTGGCC
GACGCCGGCG CACCGCCCGC CCTCGCAGCC CAGCTCGCGA TCCTCGCCGA GGGCGCGCAG
ACCACCGCGG CGATCTCCGG CGACGCCTCT GTCGCCGCGC AGGCACGCGG GGCCGCCGAG
GTGCTCGTCG CCGCGGCCGG CGTGGCGGTC CCAGCCTGA
 
Protein sequence
MDGMTTDDLR ESIIDAADRL YYAKGYAAVG MDELRTEAGV SLRRLYTVFA SKDDIVLAVL 
DRRHQTWESG LAESVARAAD PRDRLLAIYD YLADWFCDDE FRGCGFINAF GELGGTRPAV
AEAAREHKAS FQRYVAGLVA DAGAPPALAA QLAILAEGAQ TTAAISGDAS VAAQARGAAE
VLVAAAGVAV PA