Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_34670 |
Symbol | |
ID | 8635100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3874289 |
End bp | 3875413 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | amino acid ABC transporter membrane protein |
Protein accession | YP_003316189 |
Protein GI | 269796734 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.220072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCAG CACTCTCCAC CCCACCCTCG ACGGGTAGCC CGGCGTCGCC CCCGCCGGTC GACCGCTCGA CCGGCCCGGC CCCCTCGGCG CTCCCGCGTG CGACGCGCGC CGAGCTCGAG TCCCTGCGCG TCGTCGGCGC GCGCCACCCG TGGCGCTACG TCGCGACCGC AGCCGTCGCC GTCCTCCTCG CGATGGTCGT CAGCTCGCTC GTGACGAACC AGCGCTGGGA GTGGTCGATC GTCTTCCAGT ACCTCACCTG GCCGTCGATC CTCTCGGGGC TCTGGGGCAC CCTGCGGCTC ACCTTCGTCG CCGCGGTGAT CGGCTTCGGG CTCGGCACGG TGCTCGCCCT CATGCGGCTG TCCCGCTCGC CGCTGCTGCG CGCCGTCTCG TGGGCCTACA CGTGGGTGTT CCGGTCCGTG CCGCTGATCC TCCAGCTGCT GCTCTGGTAC AACCTCGCGT ACCTCTACCC GACGCTCAGC CTCGGGATCC CCTTCGGGCC GTCCTTCGCG GAGTTCGGCA CCCTCGACGT CATCAACAAG TTCGGGGCCG CGATCCTCGG CCTCGGGCTC TCGCAGGCGG CGTACTCGGC GGAGATCGTC CGGGCCGGCA TCCTCAGCGT CGACCAGGGA CAGCACGAGG CCGCCGCAGC CCTGGGCATC CCGCGGGCAC GGCAGTCCAC CCGCATCGTG CTCCCGCAGG CCATGCGCAC CATCGTCCCG ACCTCGGTCA ACGAGATCAT CGGCCTCGTC AAGGGCACCT CGGTCGTGTA CGTCCTGGCC TACGGCGAGC TGTTCTACAC CGTCGGCGTC ATCTACGGGC GCAACCAGCG GGTGGTCCCG CTGCTCATGG TCGCGGCCAT CTGGTACGTC ATCATCACCA CGGTCATCAC CGTGATCCAG TTCTACGTGG AACGTCACTA CGCCAAGGGC GCGGTCCGCA CGCTCCCGCC GACACCGATC CAGGTGGCCC GGTGGACGCT CCTGCGCACC TGGTCGCGCC TCACCGGGCG CCCGCCGCAC CCGTCGCTCC CGCCCGCCTT CGCGGTGCGG ACCGGCAACG GCCGAGGGCA CCTCACCCGG ACCGGACGCC CGAGCACGAC CCGCACCGAG GGAGATGCCG TATGA
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Protein sequence | MSSALSTPPS TGSPASPPPV DRSTGPAPSA LPRATRAELE SLRVVGARHP WRYVATAAVA VLLAMVVSSL VTNQRWEWSI VFQYLTWPSI LSGLWGTLRL TFVAAVIGFG LGTVLALMRL SRSPLLRAVS WAYTWVFRSV PLILQLLLWY NLAYLYPTLS LGIPFGPSFA EFGTLDVINK FGAAILGLGL SQAAYSAEIV RAGILSVDQG QHEAAAALGI PRARQSTRIV LPQAMRTIVP TSVNEIIGLV KGTSVVYVLA YGELFYTVGV IYGRNQRVVP LLMVAAIWYV IITTVITVIQ FYVERHYAKG AVRTLPPTPI QVARWTLLRT WSRLTGRPPH PSLPPAFAVR TGNGRGHLTR TGRPSTTRTE GDAV
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