Gene Sked_34300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34300 
Symbol 
ID8635063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3832494 
End bp3834479 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content74% 
IMG OID 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain 
Protein accessionYP_003316154 
Protein GI269796699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.183589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CGAAGAGCCC CAGCGGCTCG ACCCAGGACA CCGCGACCGG GTCGCCGGTG 
ACCGACGGGC GGTCCGGCGC GACCAGGTCA CCCGTGACCA CCCGGTCGGC TGCGACCCAG
ACCGGCAAGA CCCGTGACCA GCCGGCGCGC TCCGGGCCGC TCCTCGTCGT CGAGGGCCTC
GAGGTCGCGT ACCGCACGCG TCGCGGCACC GTCCCGGCGG TCCGCGGCGT CGACCTGCAC
GTCGACGCCG GCGAGGTCGT GGCCGTCGTC GGCGAGTCCG GCTCGGGCAA GACCACCACC
GCGCAGGCGA TCATCGGGCT GCTGCCGCGC GGCGGCGTGC GGACCGCCGG GCGCATCGTG
CTCGGCGGGA CCGACATCAG CGCGTGGGGC GACAAGGAGC TCGAGCAGGT CCGCGGTGCC
CGCCTCGGCC TCGTGCCGCA GGACCCGACC GTCTCCCTCA ACCCGGTCCG GCGCATCGGC
GACCAGGTGG CGGACGTGCT CGTCGTCCAC TCCGGGCTCG CCCGCCGGGC CACGGGGGAG
CGGGTCGTCG AGATCCTCGA GCAGGCCGGG CTGCGCGACC CCGAGGCGGT CGCCCGCCAG
TACCCGCACC AGCTGTCCGG CGGCATGCGC CAACGGGTGC TCATCGGCAT CGCGCTCGCC
TGCCGGCCCG AGCTGGTCAT CGCCGACGAG CCCACCTCTG CCCTCGACGT CACCGTGCAG
CGCGCGGTCC TCGACCACCT CGGGTCCCTG ACCGCCGAGC TCGGCACCGC CGTGCTGCTC
GTCACCCACG ACCTCGGCGT CGCCGCCGAG CGGGCCCAGC GCGTCGTCGT CATGAACAAG
GGGAGGGTGG TCGAGGAGGG CAGCGCCCGG CAGATCCTCG AAGACCCGCA GGACCCGTAC
ACGAAGGCGC TCGTCGCCGC GGCGCCGTCG CTCTCGCCGA GCAGGCTGCG GCCGCGGGCG
CTGGTGGGGT CGGCAGCGTC GGCTCCTGCA GCGGCGTCGA CCCCGCTGGC TGGGCCGGTC
TCGGCTGCCT CGCCGACCGA CGGGGCGAGC GGCCCGGGTG CCTCCGCCGT CTCGCTCGAG
CCGGTCGTCG AGGTGCGCGA CCTCGTCAAG GAGTTCTCCG TGCCGCAGCA CGGTGGCGGC
AAGAAGACCC TGCGGGCGGT CGACGGCGTG TCCTTCTCGG TCCCGCGCGG CGAGACCTTC
GCGATCGTCG GCGAGTCCGG GTCGGGGAAG TCCACCACCG CGCGTCTCGT GCTGCGCCTC
GCCGACCCGA CCTCCGGCTC CGTGCACGTC GACGGCCAGG ACATCACCCG GGTGCGCGGC
CGACGCCTGC GTCGTCTCCG CGAGCACCTG CAGCTCGTCT ACCAGAACCC CTACGCGTCG
CTCGACCCGC GGTTCACCAT CGCGCAGGTG CTCACCGAGC CGCTCGAGGC GTTTCGCGTC
GGCGACCGGG CGTCGCGCGC GCGGCGCGCC GCGGAGCTGC TCGACCAGGT GGCGCTGCCG
ACGTCGGCGC TCCACCGGCA CCCCGCCGAG CTCTCGGGCG GACAGCGCCA GCGCGTCGCG
ATCGCCCGGG CGCTCGCCCT GCACCCGCAG GTGGTCGTCC TCGACGAGCC GGTGTCGGCC
CTCGACGTCT CCGTCCAGGC ACAGATCCTC CAGCTGCTCG TCGACCTGCA GCACGACCTC
GGGCTCAGCT ACCTGTTCAT CTCGCACGAC CTCGCGGTCG TGCGGCAGAT CTCCGACCGC
GTCGGCGTGA TGTCGCGGGG CAGGCTCGTC GAGAGCGGCA CGACCGAGCA GATCTTCGCT
GACCCCCAGC ACGAGTACAC GCAGGCGCTG CTCGAGGCGA TCCCTGGTCG CGTCGAGGCT
GTCGCCGGTC GCGACGGGGT GTCCCCGCTC GCGACGGGGA GCGGCGCGAC CGCGCGTCTG
TGCAGGGAGC CTGACTCTCC GCGACCCATC TCAGCCAGTC ATCACCACCG AGAGGACTCA
TCATGA
 
Protein sequence
MSSTKSPSGS TQDTATGSPV TDGRSGATRS PVTTRSAATQ TGKTRDQPAR SGPLLVVEGL 
EVAYRTRRGT VPAVRGVDLH VDAGEVVAVV GESGSGKTTT AQAIIGLLPR GGVRTAGRIV
LGGTDISAWG DKELEQVRGA RLGLVPQDPT VSLNPVRRIG DQVADVLVVH SGLARRATGE
RVVEILEQAG LRDPEAVARQ YPHQLSGGMR QRVLIGIALA CRPELVIADE PTSALDVTVQ
RAVLDHLGSL TAELGTAVLL VTHDLGVAAE RAQRVVVMNK GRVVEEGSAR QILEDPQDPY
TKALVAAAPS LSPSRLRPRA LVGSAASAPA AASTPLAGPV SAASPTDGAS GPGASAVSLE
PVVEVRDLVK EFSVPQHGGG KKTLRAVDGV SFSVPRGETF AIVGESGSGK STTARLVLRL
ADPTSGSVHV DGQDITRVRG RRLRRLREHL QLVYQNPYAS LDPRFTIAQV LTEPLEAFRV
GDRASRARRA AELLDQVALP TSALHRHPAE LSGGQRQRVA IARALALHPQ VVVLDEPVSA
LDVSVQAQIL QLLVDLQHDL GLSYLFISHD LAVVRQISDR VGVMSRGRLV ESGTTEQIFA
DPQHEYTQAL LEAIPGRVEA VAGRDGVSPL ATGSGATARL CREPDSPRPI SASHHHREDS
S