Gene Sked_33500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33500 
Symbol 
ID8634983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3746186 
End bp3748483 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content71% 
IMG OID 
Productpolyphosphate kinase 
Protein accessionYP_003316079 
Protein GI269796624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.418416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT CGACCGCGAC CTCTCGGCGC ACCCCTGGGA CCGGACCCGT CACGCCCTCG 
CCGGGCTCGG CACCGATCGA CCCCGAGCTC GCGGCGCACA TCGCCGAGCA CATCGGCGAG
CGCGAGACCG TCGCGTCCGG CGCCGAGCTC GAGCCGCTGC CCGACGACCG CTTCGGCGAC
CGCGAGCTGT CGTGGCTCGC CTTCAACGAG CGGGTCCTCG AGCTCGCCGA GGACGAGGCG
CAGCCGCTGC TGGCCCGGGT GCGGTACCTG GCGATCTTCG CGTCGAACCT CGACGAGTTC
TTCATGGTGC GCGTCGCCGG CCTCAAGCGC CGCATCGCGA CCGGCCTCGC GGTCACGGCC
GCGTCCGGCC TCACCCCGCG CCAGGTGCTC GACGCCATCG GCACGCGGGC GCACGACCTC
ATGGCGCGCC ACGCCAAGGC GTTCTCCGAG CACGTGCAGC CGGCGCTCGG CGCCGAGGGC
ATCACGCTGG TGCGCTGGGA GGACCTGTCG CAGCAGGAGC AGGACCGCCT GCACAAGTTC
TTCCGCAAGC AGATCTTCCC GGTGCTCACG CCGCTGGCCG TGGACCCTGC GCACCCGTTC
CCGTACATCT CGGGGCTCTC GCTCAACCTC TCGGTGGTCG TGCTCAACCC GACCACCAAG
AAGGAGCACT TCGCGCGCGT GAAGGTCCCG CCGCTGCTCC CCCGGTTCAT CGCCGTGGAC
GCCAAGGGCC GTCCGAGCGC GCCGAGCACG CAGGCCACAC GGACCGGGCC GACGTCCTTC
GTGCCGCTCG AGGACATCAT CTCCCACCAC CTCGACCACC TGTTCCCGGG CATGGAGGTG
CTCGAGCACC ACACCTTCCG GGTGACGCGC AACGAGGACG TCGAGGTCGA GGAGGACGAC
GCCGAGAACC TCCTCAAGGC CATGGAGAAG GAGCTGCTGC GCCGCCGGTT CGGACCGCCG
GTGCGCCTCG AGCTCGCCGA GGGCATCAGC CCGCGCATCC GCCAGCTGCT GATCCGCGAG
CTCGGCGTCG TCGAGGACGA GGTCTACACG CTCCAGGCGC CCCTCGACCT CACCGGGCTC
AACCTCATCG CGGACATCGA CCGCGCGGAC CTGCAGTACC CGCGGTTCGT GCCGACCACC
CACCGGTTCC TCGCCGAGGT CGAGAGCGCG ACGCCGTCGG ACATCTTCGC GGCGATCCGC
GAGCGCGACG TCCTGCTGCA CCACCCGTAC GACTCGTTCT CGACGTCGGT CCAGACCTTC
CTCGAGCAGG CGGCGGCCGA CCCCGACGTC CTGGCCATCA AGCAGACGCT CTACCGCACC
TCGGGCGACT CCCCGATCGT CGACGCCCTC ATCGAGGCCG CCGACGCCGG CAAGCAGGTG
CTGGCGCTGG TCGAGATCAA GGCGCGCTTC GACGAGCAGA ACAACATCTC GTGGGCCCGC
AAGCTCGAGC AGGCCGGCGT GCACGTGGTC TACGGCATCG TGGGCCTCAA GACGCACTGC
AAGCTGTCGC TCGTGGTGCG CCAGGAGCCG GACGGCCTGC GGCGCTACTG CCACGTCGGG
ACAGGCAACT ACAACCCGAA GACGGCGCGC CTGTACACCG ACCTCGGCCT GCTCACCTGC
GACCCCGACG TCGGCCAGGA CCTCACCCGC CTGTTCAACC AGCTGAGCGG CTACGCGCCC
CAGTCCCGGT TCCACCGGCT GCTCGTCGCC CCGCGCTCCG TGCGCTCGGG GCTCGTGGAG
CGCATCGACC GCGAGGCCGC CGCCGCGCGC GAGGGCAAGC CGGCGTGGAT CAAGATGAAG
GTCAACTCCG TGGTCGACGA GGCCACCATC GACGCGCTCT ACCGCGCGTC GCAGGCGGGC
GTGCCGGTCG ACCTCGTGGT GCGCGGCATC TGCGCCGTGC GCCCGGGTGT CCCGGGGCTC
AGCGAGACCA TCCGGGTGCG GTCGATCCTC GGTCGGTTCC TCGAGCACTC GCGGATCTTC
GCCTTCGCCA ACTCCTCCGG CCCGGCGATC GCCGAGGGGC CGGCGAGCGG CCCCGAGGTG
TACATCGGGT CGGCCGACCT CATGCACCGC AACCTCGACC GACGGGTCGA GACCCTGGTG
CGCCTGACGG ACGAGACGCA GATCAACGGG CTGGTCGACC TCATCGACGC CTCGATGTCT
CCCGAGTCGG CCTCGTGGCA CCTCGCGGCC GACGGGACGT GGACCCGGCA CCACCTGGAC
GAGGACGGCC AGCCTCTCGG CGACGTCCAG CACGACCTCA TCGTGCGTCA GCGTCGTCGG
ATGGTCCTCG GCCGATGA
 
Protein sequence
MSESTATSRR TPGTGPVTPS PGSAPIDPEL AAHIAEHIGE RETVASGAEL EPLPDDRFGD 
RELSWLAFNE RVLELAEDEA QPLLARVRYL AIFASNLDEF FMVRVAGLKR RIATGLAVTA
ASGLTPRQVL DAIGTRAHDL MARHAKAFSE HVQPALGAEG ITLVRWEDLS QQEQDRLHKF
FRKQIFPVLT PLAVDPAHPF PYISGLSLNL SVVVLNPTTK KEHFARVKVP PLLPRFIAVD
AKGRPSAPST QATRTGPTSF VPLEDIISHH LDHLFPGMEV LEHHTFRVTR NEDVEVEEDD
AENLLKAMEK ELLRRRFGPP VRLELAEGIS PRIRQLLIRE LGVVEDEVYT LQAPLDLTGL
NLIADIDRAD LQYPRFVPTT HRFLAEVESA TPSDIFAAIR ERDVLLHHPY DSFSTSVQTF
LEQAAADPDV LAIKQTLYRT SGDSPIVDAL IEAADAGKQV LALVEIKARF DEQNNISWAR
KLEQAGVHVV YGIVGLKTHC KLSLVVRQEP DGLRRYCHVG TGNYNPKTAR LYTDLGLLTC
DPDVGQDLTR LFNQLSGYAP QSRFHRLLVA PRSVRSGLVE RIDREAAAAR EGKPAWIKMK
VNSVVDEATI DALYRASQAG VPVDLVVRGI CAVRPGVPGL SETIRVRSIL GRFLEHSRIF
AFANSSGPAI AEGPASGPEV YIGSADLMHR NLDRRVETLV RLTDETQING LVDLIDASMS
PESASWHLAA DGTWTRHHLD EDGQPLGDVQ HDLIVRQRRR MVLGR