Gene Sked_33410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33410 
Symbol 
ID8634974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3722472 
End bp3723551 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content75% 
IMG OID 
ProductNADH:flavin oxidoreductase 
Protein accessionYP_003316070 
Protein GI269796615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.374092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAC CGCTGCTCTT CGAGCCCCTC ACGCTGCGCT CCGTCACCTT CCCCAACCGG 
GTCTGGCTCG CACCCATGTG CCAGTACTCC GCGGTCGACG GGGTGCCGGG GGACTGGCAC
CTGGTGAACC TCGGGGCGCG CGCCCAGGGC GGCTTCGGGC TCGTGGTCGC CGAGGCCAGC
GCAGTCGTCC CCGAGGGGCG CATCACCCCG CAGGACACCG GGATCTGGTC GCAGGAGCAG
ACCGAGGCGT GGGGACGCGT CGTAGACTTC GTGCACTCCC AGGGCGCGCG GGCCGGCATC
CAGCTCGCGC ACGCCGGCCG CAAGGCCTCG ACCTTCCGCC CGTGGAGCGA GCAGCGCGGC
TCCGTGCCCA CGGACGACGG CGGCTGGGAG ACCGTCGGGC CCTCCGACGA GGCGTTCCCC
GGCTACTCCG CCCCGCGCGA GATGACCGTC GCCGAGATCC AGGCCGTCCC GGGTGCCTTC
GCCGACGCAG CGGTGCGGGC CCACGAGGCA GGCTTCGACG TGGTGGAGAT CCACGCCGCG
CACGGGTACC TGCTGCACCA GTTCCTGTCG CCGCTGTCCA ACCGGCGCAC CGACGGCTAC
GGCGGGTCCC TCGAGGCGCG CTCGCGGCTC CTCGTCGAGG TGACGGACGC CGTCCGGGCC
GAGTGGCCCG CCGACAAGCC GCTGTTCGTC CGCGTCTCCG CCACTGACTG GCTCCCCGAC
GGCCTCTCGG TCGACGACGT CGCGCAGGTG TCCAAGGTGC TCGGCGAGCA CGGCGTCGAC
CTCGTCGACG TCTCGACCGG TGGCAACGCG CCCGCCCAGA TCCCGGTCGG CCCGGGCTAC
CAGGTGCCCG CCGCGCGCGA CGTCCGGGGC GTGGCCGGGA TCCCGGTGAG CGCCGTCGGC
CTCATCACCG AGCCCGCCCA GGCCGAGCAG GTCCTCGCAG ACGGCTCGGC CGACGCCGTG
ATGCTCGGCC GCGAGGCCCT GCGCGACCCC CACTGGCCGC TGCGCGCCGC GCACGAGCTC
GGTGTGCCCG TCGAGGACGC GCGGTGGCAG CCGCAGTACG TGCGGGGGGC GTGGGTCTGA
 
Protein sequence
MTSPLLFEPL TLRSVTFPNR VWLAPMCQYS AVDGVPGDWH LVNLGARAQG GFGLVVAEAS 
AVVPEGRITP QDTGIWSQEQ TEAWGRVVDF VHSQGARAGI QLAHAGRKAS TFRPWSEQRG
SVPTDDGGWE TVGPSDEAFP GYSAPREMTV AEIQAVPGAF ADAAVRAHEA GFDVVEIHAA
HGYLLHQFLS PLSNRRTDGY GGSLEARSRL LVEVTDAVRA EWPADKPLFV RVSATDWLPD
GLSVDDVAQV SKVLGEHGVD LVDVSTGGNA PAQIPVGPGY QVPAARDVRG VAGIPVSAVG
LITEPAQAEQ VLADGSADAV MLGREALRDP HWPLRAAHEL GVPVEDARWQ PQYVRGAWV