Gene Sked_33140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33140 
Symbol 
ID8634947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3688669 
End bp3691044 
Gene Length2376 bp 
Protein Length791 aa 
Translation table11 
GC content75% 
IMG OID 
Productbeta-glucosidase-like glycosyl hydrolase 
Protein accessionYP_003316043 
Protein GI269796588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC AGACAACCGG GGCAGCCACC GGCACCCCCG AGCTGGACGC CCCGTGGAGG 
GACACCCGGC TCGCACCGGC CGAGAGGGCT GCGGCGCTGG TCGCCGTGAT GACCCTCGAG
GAGAAGATCG CGCAGCTCGT CGGCGTCTGG GTCGGCGCCG ACGCCTCCGG CGGGGGCGTC
GCACCGCACC AGGCCGACCT CACCCAGGAC GTCCCGCCGT GGGACACGCT CGTCCAGCAC
GGCCTCGGAC AGCTGACCCG GCCCTTCGGC ACCGTCCCGG TCGACCCGGT CTCCGGGGCC
CGGTCGCTCG CCGCCTCGCA GGAGCAGATC ATGGCGGCCA GCCGCTTCAG CATCCCCGCG
CAGGTCCACG AGGAGTGCCT CGCAGGCTTC GCCGCCTGGC AGGCCACCGC CTATCCTGTC
CCGCTGTCCT GGGGAGCGTC CTTCGACCCG GAGCTCGTCG CAGAGATGTC CCGGCAGATC
GGCACGTCCA TGCGAGCAGC CGGTGTCCAC CAGGGCCTCG CCCCGGTCCT CGACGTGACC
CGCGACTACC GCTGGGGCCG CACCGAGGAG ACCATCGGCG AAGACCCGTA CCTCGTCGGT
ACCGTCGGCG CGGCCTACGT GCGCGGCCTC GAGGACGCCG GGGTCGTCGC GACCCTCAAG
CACTTCGCCG GGTACTCGGC CTCCCGCTCG GGCCGCAACC TCGCCCCGGC GTCGATGGGC
CCGCGCGAGC TCGGAGACGT GATCCTGCCG CCCTTCGAGA TGGCGCTGCG CCTCGGCGGG
GCCCGCTCGG TCATGCACTC CTACGCCGAG GTCGACGGTG TCCCGGCCGC CGCCGACGAG
GGGCTGCTCA CCGCGCTCCT CCGCGAGACC TGGGGTTTCG ACGGGACCGT CGTCGCCGAC
TACTTCGGCG TGAAGTTCCT CGAGACGCTC CACAAGGTCG CCGCCGGCCC CACCGAGGCC
GCGCACCTCG CGCTGCGCGC CGGGGTCGAC GTCGAGCTCC CCACGGTCGA CGCCTACGGA
CCGGCGCTCG TCGAGGCCGT CCGGCGCGGC GAGGTCCCCG AGGCGCTCGT CGACCGCGCG
CTCGACAGGG TGCTCACCCA GAAGGCCGAG CTCGGTCTCC TCGACCCCGG CTGGCAGGCC
CTGCCCGAGG ACGTCGACAC CCTCACCCTC GACGACGCCG AGCGTCAGGA CGTCGCACTG
CGGCTCGCCC GCGAGGCCGT CGTCCTCCTC ACCAACCAGG ACTCGACGCT GCCGCTCACC
CCTGGTGCCC GGGTCGCGCT CGTCGGCCCG CTCGCCGACC AGCCGATGGC GATGCTCGGC
TGCTACTCCT TCCCCGCTCA CGTCGGGGTG CACCACCCCG ACCACGCCGT CGGGATCGAC
ATCCCGTCGG CCCGCGCCGC CCTCGCCGAG CACCACGACG TGACCTACGC CCGCGGCTGC
GACGTGAGCG ACCCCGACCG CAGCGGCATC GCGGAGGCGG TCGAGCGCGC CCGTGACGCC
GACGTGTGCG TCGTCGCCGT CGGCGACCGC GCCGGGCTCT TCGGCCGAGG GACCTCGGGC
GAGGGCTGCG ACGCGACCGA CCTGCGGCTG CCCGGCGTGC AGGCCGAGCT CGTCGAGGCA
GTGCTCGCCA CCGGGACCCC CGTCGTCCTG CTGCTCCTCA CCGGTCGGCC GTACGCCCTC
GGCCACCTCG CCGACGAGGC CGCGGCGGTC GTGCAGGCCT TCTTCCCGGG GCAGCTCGGC
GGGGTGGCGC TCGCGGAGAT CCTCACCGGG GCGGTCTCGC CCTCGGGCCG GCTGCCCGTG
AGCATCCCGT CGGATCCAGG TTCGCAGCCC GGCACCTATC TCTCGGCCCC GCTCGGTCGC
AGGTCGAGCG TCTCCTCGGT CGACCCGACC CCGGCCTTCC CCTTCGGCCA CGGACTCGGC
TACGCGTCGA TCTCCTGGGG CGAGGCTGGC GTCGTCGGCG CGGAGCCGGG CGACCGCGCG
GTGTGGCCTG TCGACGGCGA GGTCACCGTC GAGGTGACGC TCGAGAACAC CGGCGACGTC
GCCGGGGCGG ACGTCGTCCA GCTGTACCTG CACGACCACG TCGCGCAGGT GACGCGGCCC
GTCGTCCGGC TCGTCGGCTA CGCACGGGTC GCCCTCGAGC CGGGCGAGTC GCGGCGCGTC
ACCTTCACGG TGCACGCCGA CCTCACGTCC TTCGTCGGGC TCGCCGGCCA CCGGGTCGTC
GAACCCGGAG ACGTCGACCT GCTCGTGTCC CGCGCCAGCG ACCAGGTGAG CACCACGATC
CCGCTCCGGC TCGTCGGCGA CGAGCGCACG GTCGACCACA CCCGCCGGCT CGTCACGGAG
GTCGGCGTCG ACGCGCCAGG ACGGGGCCGG CCGTGA
 
Protein sequence
MTTQTTGAAT GTPELDAPWR DTRLAPAERA AALVAVMTLE EKIAQLVGVW VGADASGGGV 
APHQADLTQD VPPWDTLVQH GLGQLTRPFG TVPVDPVSGA RSLAASQEQI MAASRFSIPA
QVHEECLAGF AAWQATAYPV PLSWGASFDP ELVAEMSRQI GTSMRAAGVH QGLAPVLDVT
RDYRWGRTEE TIGEDPYLVG TVGAAYVRGL EDAGVVATLK HFAGYSASRS GRNLAPASMG
PRELGDVILP PFEMALRLGG ARSVMHSYAE VDGVPAAADE GLLTALLRET WGFDGTVVAD
YFGVKFLETL HKVAAGPTEA AHLALRAGVD VELPTVDAYG PALVEAVRRG EVPEALVDRA
LDRVLTQKAE LGLLDPGWQA LPEDVDTLTL DDAERQDVAL RLAREAVVLL TNQDSTLPLT
PGARVALVGP LADQPMAMLG CYSFPAHVGV HHPDHAVGID IPSARAALAE HHDVTYARGC
DVSDPDRSGI AEAVERARDA DVCVVAVGDR AGLFGRGTSG EGCDATDLRL PGVQAELVEA
VLATGTPVVL LLLTGRPYAL GHLADEAAAV VQAFFPGQLG GVALAEILTG AVSPSGRLPV
SIPSDPGSQP GTYLSAPLGR RSSVSSVDPT PAFPFGHGLG YASISWGEAG VVGAEPGDRA
VWPVDGEVTV EVTLENTGDV AGADVVQLYL HDHVAQVTRP VVRLVGYARV ALEPGESRRV
TFTVHADLTS FVGLAGHRVV EPGDVDLLVS RASDQVSTTI PLRLVGDERT VDHTRRLVTE
VGVDAPGRGR P