Gene Sked_32880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32880 
Symbol 
ID8634921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3661746 
End bp3662975 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content75% 
IMG OID 
Productgalactokinase 
Protein accessionYP_003316017 
Protein GI269796562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.226542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.212245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCA TCGACGTGGA CTGGCTCGAC GCCTGGGATG TCGAGGACGG CAGCGCGCAG 
GCGCGCGCCC TCTTCACCGA GGTCTTCGAC GCGGCGCCCG AGGGCGTCTG GTCGGCGCCT
GGCCGCGGCA ACCTCATCGG TGAGCACACC GACTACAACG GCGGTCTCGT GCTGCCCTTC
GCGCTGCCGC ACCGCACCTA CGCGGCCATC ACGCGCCGCA CGGACCGCAC GGTCCGCCTC
GTCTCCGCGC AGGAGGCCGG GACGGTCGTC ACGGTCGACC TCGACACCGT CGCCCCTGGC
ACGGTCACCG GGTGGGCTGC CTACGTCGTG GGTGTCGCCT GGGCGCTCGA GCAGGCGGGT
GCGACGCTCG GCGGCTTCGA CGTGGCCATC ACCTCGTGCG TGCCGTACGG CGCCGGGCTG
TCGTCGTCGG CCGCCCTCGA GGGGTCGGTC GCGATCGGCC TCGACGCGCT CTACGGCCTC
GGCCACGGGG CCGACGACGC GGGGCGCCAG CACCTCGTCG CCGCGTGCAT CCGCGCGGAG
AACGAGATCG CCGGAGCCCC GACCGGCGGC ATGGACCAGG CCGCGGCGCT CCGCTCGCAG
GAGGGCCACG CGCTGCTGCT CGACTGCCGC AGCCTCGAGG TCCGCCAAAT CCCCTTCGAC
CTCGCCTCGG ACGGTCTCGC TCTCCTGGTG ATCGACACGC GAGCCCCGCA CGCGCTCGTC
GACGGCCAGT ACGCGGCCCG CCGGGACACC TGCGAGGCGG CAGCGGCCGT CCTCGGCGTC
GAGACGCTGC GTGAGGTCAC CGACCTCGAC GCCGCCCTCG CGACGCTCGC CGCACCCGGG
GCGCTCGACG CGTCGGGTCA GGACCCCGAG GTCACGGCAC GCCGCGTCAA GCACGTGGTC
AGCGAGATCG CGCGCGTCGG CGAGGTCGTG GCGCTGCTCG ACTCCGGCCG CACCTCCGAG
GTCGGGGCTG TGCTCTCGGC GGCTCACGCG TCGCTCCGCG ACGACTACGA GGTCAGCTGC
CATGAGCTCG ACGTCGCCGT GGACGCCGCG GTGCACGCTG GAGCGCTCGG CGGCCGGATG
ATCGGCGGCG GCTTCGGCGG CTCGGCCATC GCCCTGGTCC GCGTCGAGGA CGCCGAGCAG
GTCGCCGGCG AGATCGCCGC AGCCTTCGAG TCCGAGGGCC TGACGGCCCC CGGGTTCCTC
GTGGCGGTCG CAGGCGGCCC CGCGGCCTGA
 
Protein sequence
MTSIDVDWLD AWDVEDGSAQ ARALFTEVFD AAPEGVWSAP GRGNLIGEHT DYNGGLVLPF 
ALPHRTYAAI TRRTDRTVRL VSAQEAGTVV TVDLDTVAPG TVTGWAAYVV GVAWALEQAG
ATLGGFDVAI TSCVPYGAGL SSSAALEGSV AIGLDALYGL GHGADDAGRQ HLVAACIRAE
NEIAGAPTGG MDQAAALRSQ EGHALLLDCR SLEVRQIPFD LASDGLALLV IDTRAPHALV
DGQYAARRDT CEAAAAVLGV ETLREVTDLD AALATLAAPG ALDASGQDPE VTARRVKHVV
SEIARVGEVV ALLDSGRTSE VGAVLSAAHA SLRDDYEVSC HELDVAVDAA VHAGALGGRM
IGGGFGGSAI ALVRVEDAEQ VAGEIAAAFE SEGLTAPGFL VAVAGGPAA