Gene Sked_32340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32340 
Symbol 
ID8634867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3602882 
End bp3603676 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type antimicrobial peptide transport system, ATPase component 
Protein accessionYP_003315964 
Protein GI269796509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.442827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCA CCGCCAGCAC CGCCTCCGTC CCGCCCGCGG GCGCGGCGGA CGCGTCCGAC 
GCCATCGCGT CGGCCCGCGG CCTCACCAAG ACCTACGGCA AGGGCTCGAC GGTCGTCCGC
GCCCTCGACG GCGTCGACGT CGACTTCGCC CGGGGGCAGT TCACCGCGAT CATGGGGCCG
TCAGGCTCCG GCAAGTCGAC GCTCATGCAC TGCATGGCGG GGCTCGACAC CCCGACCTCG
GGCACCGTCG TCGTCGACGG CCTCACGGTC TCCTCGATGA ACCAGCGCCA GCTCACCCGG
TTGCGGCGCA CCCAGCTCGG CTTCATCTTC CAGTCCTTCA ACCTCGTGCC GACCCTGACG
GCCGAGGAGA ACATCACGCT GCCCCTCGAC ATCGCCCGGA CACCGGTCGA CCGGGCGTAC
CTCGCCGAGG TGGTCGAGGC CGTGGGCCTC GGAGACCGCC TGAAGCACCG TCCGTCCGAG
CTCTCGGGCG GTCAGCAGCA GCGCGTGGCG TGCGCCCGTG CACTCGTGTC CAAGCCGTCC
GTGGTGTTCG CCGACGAGCC GACCGGGAAC CTCGACTCCA CGTCCTCGCG CGAGGTGCTG
TCGTTCCTGA GGTCCTCGGT CGACGACCTC GGTCAGTCGG TCGTCATGGT CACCCACGAC
CCCGTCGCCG CGAGCAACGC CCACCGGGTG CTGTTCCTCG CCGACGGCCA GATCGTCGCC
GAGCTCACCG AGCCCACCCC GGACACCGTC CTCGAGGTCC TCGGCTCGCT CTCGCGCGGG
ACGGCGGGCG ACTGA
 
Protein sequence
MSPTASTASV PPAGAADASD AIASARGLTK TYGKGSTVVR ALDGVDVDFA RGQFTAIMGP 
SGSGKSTLMH CMAGLDTPTS GTVVVDGLTV SSMNQRQLTR LRRTQLGFIF QSFNLVPTLT
AEENITLPLD IARTPVDRAY LAEVVEAVGL GDRLKHRPSE LSGGQQQRVA CARALVSKPS
VVFADEPTGN LDSTSSREVL SFLRSSVDDL GQSVVMVTHD PVAASNAHRV LFLADGQIVA
ELTEPTPDTV LEVLGSLSRG TAGD