Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_32340 |
Symbol | |
ID | 8634867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3602882 |
End bp | 3603676 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC-type antimicrobial peptide transport system, ATPase component |
Protein accession | YP_003315964 |
Protein GI | 269796509 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.442827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCCA CCGCCAGCAC CGCCTCCGTC CCGCCCGCGG GCGCGGCGGA CGCGTCCGAC GCCATCGCGT CGGCCCGCGG CCTCACCAAG ACCTACGGCA AGGGCTCGAC GGTCGTCCGC GCCCTCGACG GCGTCGACGT CGACTTCGCC CGGGGGCAGT TCACCGCGAT CATGGGGCCG TCAGGCTCCG GCAAGTCGAC GCTCATGCAC TGCATGGCGG GGCTCGACAC CCCGACCTCG GGCACCGTCG TCGTCGACGG CCTCACGGTC TCCTCGATGA ACCAGCGCCA GCTCACCCGG TTGCGGCGCA CCCAGCTCGG CTTCATCTTC CAGTCCTTCA ACCTCGTGCC GACCCTGACG GCCGAGGAGA ACATCACGCT GCCCCTCGAC ATCGCCCGGA CACCGGTCGA CCGGGCGTAC CTCGCCGAGG TGGTCGAGGC CGTGGGCCTC GGAGACCGCC TGAAGCACCG TCCGTCCGAG CTCTCGGGCG GTCAGCAGCA GCGCGTGGCG TGCGCCCGTG CACTCGTGTC CAAGCCGTCC GTGGTGTTCG CCGACGAGCC GACCGGGAAC CTCGACTCCA CGTCCTCGCG CGAGGTGCTG TCGTTCCTGA GGTCCTCGGT CGACGACCTC GGTCAGTCGG TCGTCATGGT CACCCACGAC CCCGTCGCCG CGAGCAACGC CCACCGGGTG CTGTTCCTCG CCGACGGCCA GATCGTCGCC GAGCTCACCG AGCCCACCCC GGACACCGTC CTCGAGGTCC TCGGCTCGCT CTCGCGCGGG ACGGCGGGCG ACTGA
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Protein sequence | MSPTASTASV PPAGAADASD AIASARGLTK TYGKGSTVVR ALDGVDVDFA RGQFTAIMGP SGSGKSTLMH CMAGLDTPTS GTVVVDGLTV SSMNQRQLTR LRRTQLGFIF QSFNLVPTLT AEENITLPLD IARTPVDRAY LAEVVEAVGL GDRLKHRPSE LSGGQQQRVA CARALVSKPS VVFADEPTGN LDSTSSREVL SFLRSSVDDL GQSVVMVTHD PVAASNAHRV LFLADGQIVA ELTEPTPDTV LEVLGSLSRG TAGD
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